Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03340 ATGACGAGCCTCGAAGACATCAAGAAGGAGACTGTTGATCTTGAGCGGATTCCTGTTGAAGAAGTGTTCCGAGAATTGAACTGTACCAAGGATGGACTCACCAATGAGAAAGGCCAAAAGAGATTGGAAGAAAAGAAGGAGAGCAAGGTGCTCAAGTTCTTGGGCTTCATGTGGAACCCTCTTTCATGGGTGATGGAACTAGCTGCCATCATGGCCATTGCATTAGCAAATGGAGAGAATGAGCCACCAGATTGGCAAGATTTTCTGGGTATAGTAGTGCTGTTAATCATAAGCTCCACCATCAGTTTTATAGTTgaaagagaaagaagcgtgtaa 336 0.4167 MTSLEDIKKETVDLERIPVEEVFRELNCTKDGLTNEKGQKRLEEKKESKVLKFLGFMWNPLSWVMELAAIMAIALANGENEPPDWQDFLGIVVLLIISSTISFIVERERSV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03340 111 Gene3D - 56 110 - -
Aip10g03340 111 PANTHER PLASMA MEMBRANE ATPASE 2 107 - -
Aip10g03340 111 SMART Cation_ATPase_N_a_2 13 77 IPR004014 -
Aip10g03340 111 PANTHER CALCIUM-TRANSPORTING ATPASE 2 107 - -
Aip10g03340 111 Pfam Cation transporter/ATPase, N-terminus 17 71 IPR004014 -
Aip10g03340 111 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 109 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03340 Aip-Chr10 131887765 131888100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03340 3 106 Primary Pumps ATPases AT3G42640 68.750 3.03e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03340 K01535 - gmx:100796240 164.466