Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03331 ATGAGTCTTGCTATTGATGCTATTAGAAAAATCTCTCCATGGAAGGAAAGTTGGACTATTGAGGCTAAGATCTTGACCATTTGGGAAGATGCTACCATTGTTAATCAAAATGTGCAGAAACTCTTACACATGGTCTTGATGGATAAGCAGCACCACAAAATTCAAGCAACTATTGAGGATGATTTGATTTCAACTTTTATTGATCGGTTAAAAGAAGGAGAAGTATTCATTATTTCCGACTTCAAAGTGATACCCAATCTTGGATTGGTCAGGGTTACAAGACATCGTTTTCGCATCCTTTTCAAGTGTAGTACCTCTGTTGTTGCTGCTTCAAGTACAGTCATACCCAACCCTGGTTTAAGTGTAACTTCTATGGACCAGATTCTTCAGAAGTGCATTGATTATGAGTACTTAATAGATTTTATTGGGGTGCTTTGTGGATTGAAAAAGAGAAGGGATGTTGAGTGTAATGGAAAGATATTGAAAGTTCTGACCCTTGAAGTTTTTGCTGATGGGAAGAAAATCTCCTGCAATTTTGTTGGTGATTCTCCTGCTCTTTTAGAGATGAATACTTTGAAAAGGTACAAGAGACCACCTGTTGTAATTCTGCAATCTTTCAAGATCAAAGTCAATGGAGATAAAGTCAGTCTCCAAAATGTGATCAATATTTCCCGAGTTTTGATCAACCCTGATATGCAGGAAACTGTGAATTTTCTGAATCAATATGGTATTGGGAGCCACCATTTCAGTAGACTCTGTAGTAATGAGGTTGGGGATTTGGTATGTGTAAGGGATGATGAATCTTTTGATTGGAAGCTAATACGCACTATTGATAATCTTAAGGCCAACAATGAGGATGGACAATACTTTGTGGTTGGAAAAATTAAGGAGATTGTTGAAGATCCGGAGTGGTGGTTTTTTTCTTGTGTTTGCGGTCATCCTATTGTAGGTGATGACAATGTGTTCTATTGTCAGCTGTGCAGCAGAGAGATTCAGCATTTTATGATAAGGATTAAGATACTTGTTGAAGACGGTACTTCTTGTGGAATGTTTGTCTTGTTAGACAGCCCAGCCACTAAGCTATTAGGGAGAACGTGTTCTGATGTTTTTTTGTTGTTAGAAGATGAAATCGATGATGTTAGTTCTGATTCGGCCTTTAGCCCAATATTTGAAGATTTTTCTCGGTATGGACAGCTTAGATGTTATGAGAACCAAGTCATATCTGGTGTTCGAATAGAGCTGCATAGCATTAAAGAGATTCTTGTTGACATTCTTTGTGCTAAGATGCTTCACATGCTCACGAAGAGCGTTATCCCGGCGGCTTGCTTCAAGGCAACTGAGGAATCGCATCCCACTTCCTCGGCAACGGCGGTTGCAGCTACAAAGGTCCAATCATCATCTTTTCAAGCATCTTCTTTGTCGATTGGGTTCATGGAAAAGGATCATGGAAACAATTTTTTTTTTGTTCTGATTTGTCAGATTCATTTAAAGATTGGTTGTAGTTCTCAAGAGGAAATCAGCCTAGGGTTCATGTCACTCTGCGTCTCTCTTATCTTGGGAAACAACAAGTTAGGTGGGAATTTTTCCGGCCGTCCTGTCTTTTCTGTGTCCCCTTCCATCATGTGGTGTAGCTCATATTATCAAAGTCAGAAATTGGAAAGGCCAGTTGAACATTCCCTATCCAGAATGACCCAAACAAAATTCCAGCACTATCACACCACAAGAGAGGATGTAACTGGAAGCAAACGCGACAACAACATACTTACTGCACCTCCTTCGTCTTTATTTCTTTGCTTTCACCTCCCTCAACCCGCAAACTCTACCACCGGACTTTTGCATGTTCAAAACCTCATATCCGGCTACAAGTTACCAACCTGTCCTCATCTGCGGTGGCTCACAGTGCTTCCAGTCGATGCGACACACCAGTGTTGCTTGGTGAATCGGCGCATAATTCATTATCTTCATGTTTTGACAGATCGAGGCACTAAACTTCAGCCAAGTAACAACGGGGGTGCTATTAAGGGTGACAGAGCTCTTCCCTCAAATTTTGTTTCAACTCATGGGGAAGGATTAGGGCCAATATTCTATGTCATTGACGAGTTAGATAATTGTTTATCGCTGGAGGTGATCAAAAAGAATGATCAGTTGCTGATAACTGAGAACTCATTTGAACTGATTAGAACTTTCTATCTTATCGATAGACCGGCAACTGTTCAATTTAGGTATGTTGGTTTTGGAATTTTTTTTATTTCATTGTTCGATAAGGACAACCAACCCATCCAAGTTCACCTTGATCCTGACTGCTATGTTCCTGAGCTAATGGACCCAGAGACACTTGATAATGTGTCAAGAGTCTTCCACATAAAGTATAACAGGATGGTTCATCAGCGGATGTGA 2397 0.4022 MSLAIDAIRKISPWKESWTIEAKILTIWEDATIVNQNVQKLLHMVLMDKQHHKIQATIEDDLISTFIDRLKEGEVFIISDFKVIPNLGLVRVTRHRFRILFKCSTSVVAASSTVIPNPGLSVTSMDQILQKCIDYEYLIDFIGVLCGLKKRRDVECNGKILKVLTLEVFADGKKISCNFVGDSPALLEMNTLKRYKRPPVVILQSFKIKVNGDKVSLQNVINISRVLINPDMQETVNFLNQYGIGSHHFSRLCSNEVGDLVCVRDDESFDWKLIRTIDNLKANNEDGQYFVVGKIKEIVEDPEWWFFSCVCGHPIVGDDNVFYCQLCSREIQHFMIRIKILVEDGTSCGMFVLLDSPATKLLGRTCSDVFLLLEDEIDDVSSDSAFSPIFEDFSRYGQLRCYENQVISGVRIELHSIKEILVDILCAKMLHMLTKSVIPAACFKATEESHPTSSATAVAATKVQSSSFQASSLSIGFMEKDHGNNFFFVLICQIHLKIGCSSQEEISLGFMSLCVSLILGNNKLGGNFSGRPVFSVSPSIMWCSSYYQSQKLERPVEHSLSRMTQTKFQHYHTTREDVTGSKRDNNILTAPPSSLFLCFHLPQPANSTTGLLHVQNLISGYKLPTCPHLRWLTVLPVDATHQCCLVNRRIIHYLHVLTDRGTKLQPSNNGGAIKGDRALPSNFVSTHGEGLGPIFYVIDELDNCLSLEVIKKNDQLLITENSFELIRTFYLIDRPATVQFRYVGFGIFFISLFDKDNQPIQVHLDPDCYVPELMDPETLDNVSRVFHIKYNRMVHQRM 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03331 798 Gene3D - 264 433 IPR012340 -
Aip10g03331 798 SUPERFAMILY Nucleic acid-binding proteins 6 109 IPR012340 -
Aip10g03331 798 SUPERFAMILY Nucleic acid-binding proteins 121 247 IPR012340 -
Aip10g03331 798 CDD RPA1_DBD_A_like 19 107 - -
Aip10g03331 798 Pfam Domain of unknown function DUF223 44 138 IPR003871 -
Aip10g03331 798 Gene3D - 4 111 IPR012340 -
Aip10g03331 798 SUPERFAMILY Nucleic acid-binding proteins 270 389 IPR012340 -
Aip10g03331 798 Gene3D - 114 248 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03331 Aip-Chr10 131807145 131816731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03331 1 376 Core DNA Replication Machinery Family AT5G08020 21.465 1.06e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03331 - - aip:107621285 851.277