Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03329 ATGTCTATGGCTGCTGCGTTAAACCCTCCCAAAACCCCCTTCAAAATCAACCTCACACCCGCTCTTCTGCCTCCCCCAACCTCCTCCGCACTCACTTTCAAACCAAACAACAACTTCCCCACACTCTCTGCCGCCGCACAACCACAAGAACACGGCGCTATGCTCGACACTCTTCTCAACAGCACACGCAAGAACCAAGTGCTCCACTCCATTAGAACCACCTCCCCCTTCAACTGCCTCTCCGAAACAAATCTTCACCATACAGTTCCCACCCTCACCTCCAAAACCAGGGGAAAGGTTAGAGACATATATGATAGTGGAGAGTACCTTATTCTGGTTACTACTGATCGCCAGAGTGCATTTGATAGAGTCCTTGCTTCAATTCCCTTCAAGGGACAGGTGCTTAACCAGACAAGCTTGTGGTGGTTTGAGAGAACCCAGCATATAACTGCTAATGCCGTTGTGTCCACTCCTGATCCTAATGTTACCATAGCAAAGAAATGTTCTGTTTTCCCTGTTGAGTTTGTTGCTAGAGGGTTTGTGACTGGAAGTACTGATACTTCATTATGGACAGTCTACAATAAAGGCATCCGGAACTATTGTGGCAATGCCCTCCCAGATGGTTTGGTAAAAAACCAAAAGCTGGCTGAAAATATACTCACACCTACAACCAAAGCTGCAGATCATGATGTTCCTGTAACTCCAGATGAGATTATAGAAAGGGGATTAATGACAAGAGCTGATTATGAGGAAGTCAGCAGAAAAGCTTTAAGTCTGTTTGAATACGGTCAGCGTGTGGCTTCAGAACATGGCCTTATATTGGTTGACACAAAGTATGAATTTGGGAAGGCAGAGGACGGTTCAATTATGTTGATTGATGAGGTGCACACTCCTGATTCAAGTAGATATTGGATTGCCAATTCTTATCTTGAGCGCTTTCAAAATGGTTTGGAGCCTGAAAATGTTGATAAGGAGTTCTTGAGGCTGTGGTTCAAAAATCACTGCAACCCTTATGAAGATGAGGTTCTTCCTGAAGCTCCTGAAGATCTTGTTTGTGAATTGTCTTGGCGATACATTTTCTTGTATGAGACTATAACAAGATCAAAGTTTGAGGTGCTGTCGTCTGAGGAGCCAATACATGAGCGAATATCACGAAATGTTGCATCTGCACTGGCATCTTTGAATCCAGCTGTTCTAAGAGTGAAGTGGGCACTAGCAGTTAAAGGAATAGAGTGCCGATATGTGGAAGAAGATCTCAGCAACAAGAGTGACATGCTCCTTAAATACAACCCTGTCTACAAAAAGGTACCTGTTCTTGTGCACCAGGGTAAGCCCCTTGCTGAATCACTGCTCATTCTTGAGTATATTGATGAGACTTGGAAGCAAAAACCTCTTCTTCCACATTCTCCTTATGAATGGGCCCAGGCAAGATTCTGGTCCAAATTCGTTGATGACAAGATCCTCTATCTTTCTCTGCACTGCGATAACAAATCCAGAATATTCCAAAAACGCTATGCTCCATCGCCATCACTGTTATCCGAATCCAAGGAGACAATTGAGTTGATGGGGGGAAAAAATTCTAAGCAGGACAATCATTGGAGGCAGAGTTCATATGGCCGTTCAAGTTCCTCTTCGTCTTCCTGGAATTCATATCCTCAGCCAGCTTATGGTCAGGGGGGTCATGCCTATGAGCCACAACCAACTCCTTATCCCACGGCGCAACCCTATTATGCTCCTCCTCCTCCTACTACTCAAAACTATGGCTATGAACAATCTTATACTAGCAGCGAAGTCACCCGCCCCGATAATAGAAGGAAGTTAGAGAGGAAGTATTCGAGAATTGCTGATAATTACAATTCCATAGATGAGGTGACTGAGGCTCTTGCACGGGCAGGCCTTGAGTCTTCCAATCTTATTCTTGGTATCGATTTTACTAAGAGCAATGAATGGACAGGTAAGAATTCATTTAATCGAAAAAGCTTGCATCACATTGGGAATGTTCCAAATCCTTATGAACAAGCAATATCTATTCTTGGGAAAACATTGGCTGCATTTGATGAGGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCATCAACACATGATCAAGATGTCTTCAGCTTCTATCCAGATGACAGGTTTTGCAATGGTTTTGAGGAAGTGTTGAGTCGGTACAGGGAAATTGTTCCACATATTCGACTTGCAGGTCCCACTTCGTTTGCACCAGTTGTTGAAATGGCCACGACAATCGTTGAGCAGAGTGGAGGCCAGTACCATGTTTTGGTTATAATTGCAGATGGCCAGGTTACAAGAAGTGTTGACACTGAAGGTGGGAGACTAAGTCCACAGGAACAGAAGACTGTAGATGCCATTGTTGAGGCAAGTAAATATCCTCTTTCAATCATATTGGTTGGCGTTGGAGATGGACCTTGGGACATGATGAGAGAGTTTGATGACAATATTCCAGCTCGGGACTTCGATAATTTTCAGTTTGTGAATTTCACAGAGATTATGTCAAAGAACATTCCTCCTTCACGAAAAGAGGCCGCATTTGCTCTTGCAGCATTGATGGAAATTCCTTCTCAGTATAAGGCAGCTATAGAGCTTAATCTACTTGGCACTCGGAAAGCCAATGCTCCACAGAGAGTTGCCCTTCCACCACCCATGCATGGTTCAGCATCTCTTGGTGCTTCAAAACCTTACGGGTCAGCATCTTTTGGCACTTCAAAACCTCATGCTGCTAATTTTGAGCCAAGTGTTCCCACTTATCCGAGTGACAGCAGCCTATCTGGCACGACTCATCCGGCCCCAACTCCGAATTATGACAATCTGCTTTGCCCCATATGTTTGAACAATGCAAAAGACCTGGCCTTTGGATGTGGTCATCAGACGTGTTGCGAATGTGGACAAGATCTTGAGACGTGCCCCATCTGCAGGAGCATCATTCACACCAGAATTAAGCTTTATTAG 2973 0.443 MSMAAALNPPKTPFKINLTPALLPPPTSSALTFKPNNNFPTLSAAAQPQEHGAMLDTLLNSTRKNQVLHSIRTTSPFNCLSETNLHHTVPTLTSKTRGKVRDIYDSGEYLILVTTDRQSAFDRVLASIPFKGQVLNQTSLWWFERTQHITANAVVSTPDPNVTIAKKCSVFPVEFVARGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLAENILTPTTKAADHDVPVTPDEIIERGLMTRADYEEVSRKALSLFEYGQRVASEHGLILVDTKYEFGKAEDGSIMLIDEVHTPDSSRYWIANSYLERFQNGLEPENVDKEFLRLWFKNHCNPYEDEVLPEAPEDLVCELSWRYIFLYETITRSKFEVLSSEEPIHERISRNVASALASLNPAVLRVKWALAVKGIECRYVEEDLSNKSDMLLKYNPVYKKVPVLVHQGKPLAESLLILEYIDETWKQKPLLPHSPYEWAQARFWSKFVDDKILYLSLHCDNKSRIFQKRYAPSPSLLSESKETIELMGGKNSKQDNHWRQSSYGRSSSSSSSWNSYPQPAYGQGGHAYEPQPTPYPTAQPYYAPPPPTTQNYGYEQSYTSSEVTRPDNRRKLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDFTKSNEWTGKNSFNRKSLHHIGNVPNPYEQAISILGKTLAAFDEDNLIPCFGFGDASTHDQDVFSFYPDDRFCNGFEEVLSRYREIVPHIRLAGPTSFAPVVEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEGGRLSPQEQKTVDAIVEASKYPLSIILVGVGDGPWDMMREFDDNIPARDFDNFQFVNFTEIMSKNIPPSRKEAAFALAALMEIPSQYKAAIELNLLGTRKANAPQRVALPPPMHGSASLGASKPYGSASFGTSKPHAANFEPSVPTYPSDSSLSGTTHPAPTPNYDNLLCPICLNNAKDLAFGCGHQTCCECGQDLETCPICRSIIHTRIKLY 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03329 990 SFLD Glutathione Transferase (cytosolic) 396 495 IPR040079 -
Aip10g03329 990 Gene3D - 466 529 - -
Aip10g03329 990 ProSitePatterns SAICAR synthetase signature 1. 170 184 IPR018236 GO:0004639|GO:0006164
Aip10g03329 990 Pfam Copine 660 874 IPR010734 -
Aip10g03329 990 CDD GST_N_Tau 396 460 - -
Aip10g03329 990 ProSitePatterns SAICAR synthetase signature 2. 274 282 IPR018236 GO:0004639|GO:0006164
Aip10g03329 990 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 385 464 IPR004045 -
Aip10g03329 990 PANTHER RING-FINGER PROTEIN 522 990 - -
Aip10g03329 990 Gene3D Phosphorylase Kinase; domain 1 79 173 - -
Aip10g03329 990 CDD SAICAR_synt_Sc 97 366 - -
Aip10g03329 990 CDD vWA_copine_like 614 864 IPR010734 -
Aip10g03329 990 Gene3D - 174 315 - -
Aip10g03329 990 SUPERFAMILY Thioredoxin-like 396 487 IPR036249 -
Aip10g03329 990 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 92 385 IPR028923 -
Aip10g03329 990 Pfam Glutathione S-transferase, N-terminal domain 396 458 IPR004045 -
Aip10g03329 990 Gene3D Glutaredoxin 385 465 - -
Aip10g03329 990 Pfam SAICAR synthetase 96 341 IPR028923 -
Aip10g03329 990 MobiDBLite consensus disorder prediction 584 598 - -
Aip10g03329 990 SMART VWA_4 635 838 IPR002035 -
Aip10g03329 990 MobiDBLite consensus disorder prediction 568 582 - -
Aip10g03329 990 MobiDBLite consensus disorder prediction 521 554 - -
Aip10g03329 990 CDD RING-HC_RGLG_plant 946 990 IPR045317 GO:0061630|GO:0070534
Aip10g03329 990 PANTHER COPINE FAMILY PROTEIN 1 522 990 - -
Aip10g03329 990 SUPERFAMILY SAICAR synthase-like 87 370 - -
Aip10g03329 990 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 935 990 IPR013083 -
Aip10g03329 990 SUPERFAMILY vWA-like 636 819 IPR036465 -
Aip10g03329 990 MobiDBLite consensus disorder prediction 521 604 - -
Aip10g03329 990 ProSiteProfiles Zinc finger RING-type profile. 947 980 IPR001841 -
Aip10g03329 990 Pfam Zinc finger, C3HC4 type (RING finger) 944 984 - -
Aip10g03329 990 SUPERFAMILY RING/U-box 942 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03329 Aip-Chr10 131762625 131772673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03329 395 492 Glutathione S-transferase Gene Family AT2G29490 59.184 1.07e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03329 K16280 - gmx:100799565 755.362