Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03304 ATGGATCCCTCTCGCCGAGCACCGCGCTCAGCGATCGACCCCGTCCCGAAGTTCCGCCAAGTCGGGTTCTTCACTCCTGGAGCCCCGCCCGAACGCTCTCAATCGGGTCCACCCGACCCGACCCACTCTACTCCCGTTTCCGACGTCTCACAATCCGCCAACTCGCTCTCTCCGGTCATGATCCCTCCGCCGCGCCACCTCTCCGACAATCTCGTCATCCACGCCCGCCCCACGCTTGCGTCCCCTCTCCGCGCAGATTCCCTCGCCGGTGGCGGAGTTAGCAGCTTCGGCGATTTCTTCCCCGCTCCGATGTCGCCGGCGACTCCAGCTTCTTCTTCGTACTCCAGCAGGATGGCCGCCGGCGAAGGGAGCTTCTTTGAGCGCCATGGTGGCGGAGGCGATAAGGGGAACAATGCCGGCAAAGTGGCGTCGTCATTTCCCCGCGGAGGATTCGACCTGACGGCGATGAAGAAGGTTAGTGGCATTGGCGGTGGCGGTGGCGGTGGTAGTGGCGTTGGTGTTCCGGCAAGTGAGCTGACCACCGTGTCCGTGGTGAATGATTCGCTAGCGATTCATGAAAAAGAGAAAGCAAACAGAGGAGGAGGGTCAGCTGTGGAAGTAAAAGACCAATCTACTGGTTCAAAACAACAAAAACCAAAGACCACAAAAGCTGAAAGGCGAGCTCTTCAAGAATCTCAACGTGCCGCAAAGGCTGCTGCAAAAGCTGAAGGCAACAAGGCATCTGGAGCTGCAACTTCAGTGAATGCAAAACCAGCCAAAGCTGCCAAGCCCACACCAAAAGTTGATAATGCTGCAGTTGCAGCATCTGAGAAGAAGGGTGGTGATTGTCCTCCAGAAAAGGATAGAAAGAAGGATGTTCCTCAACCACGAATGCAATATGATGACAAGAGTCGAGTGGAGAAAGCTAAGCGACGAGCTGTGGTGAAACAAACTGAAGCTAGGAACAGAGTGGAGTTGTTCAGGCATTTACCACAATATGAACACGGAAGTCAGCTTCCAGATCTTGAGTCAAAGTTTTTTCATCTGGATCCTGTACATCCAGCTGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGCGATATATGTGGTGCTAATGCTCGTTGTATTGCAATGTTTCAAGCATTTCAAGAAGCCATAAAAGACTATAGAGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAGGTAGTTATGTTTCATTTCTAAATGAGTGTAGGCCTATTTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCCTGTCTGAGTCAGAAGCCAAAGTTTCTCTCCAGTCAGATATTGAGCGTTTTATAAGTGAGAAGATTGTACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGATCATCATCGGCAGTTGAAATGATACTGTTACATGCACATGAATTGGGAAAACAGTTTCGTGTTGTTGTAGTTGATTCTCGTCCAAAGCTTAGAGGACAGCTTTTACTTCGGAGGCTTCTGGAGAAGGGTCTTAGCTGTGAATACACTCATATAAATGCTGTTTCATACATAATGCATGAAGTTACCCGAGTTTTTCTGGGTGCTTCGTCAGTGTTGTCTAATGGAACGGTATTTTCAAGGGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGCGTTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCGATATGCTCAAATGAACTTGGTGATCCAGATATAATTTCAAATGTTCGGGGTAGAGAGGATGTCAAATACTTGGATGGTTGGGCCAATGTTGAAAATCTACAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTGCCCCCCACAAGTGTTCCTGTAATTGTAAGAGAATATGGGAGAGAGCAGGTCTGGATTTAA 2034 0.4789 MDPSRRAPRSAIDPVPKFRQVGFFTPGAPPERSQSGPPDPTHSTPVSDVSQSANSLSPVMIPPPRHLSDNLVIHARPTLASPLRADSLAGGGVSSFGDFFPAPMSPATPASSSYSSRMAAGEGSFFERHGGGGDKGNNAGKVASSFPRGGFDLTAMKKVSGIGGGGGGGSGVGVPASELTTVSVVNDSLAIHEKEKANRGGGSAVEVKDQSTGSKQQKPKTTKAERRALQESQRAAKAAAKAEGNKASGAATSVNAKPAKAAKPTPKVDNAAVAASEKKGGDCPPEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLESKFFHLDPVHPAVYKVGLQYLSGDICGANARCIAMFQAFQEAIKDYRVPPEKTLVRDLTAKIGSYVSFLNECRPISISMGNAIRFLKSRIAKLPLTLSESEAKVSLQSDIERFISEKIVLANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLLEKGLSCEYTHINAVSYIMHEVTRVFLGASSVLSNGTVFSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIISNVRGREDVKYLDGWANVENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03304 677 MobiDBLite consensus disorder prediction 280 315 - -
Aip10g03304 677 Gene3D - 463 670 IPR042529 -
Aip10g03304 677 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 677 - -
Aip10g03304 677 MobiDBLite consensus disorder prediction 190 315 - -
Aip10g03304 677 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 677 - -
Aip10g03304 677 MobiDBLite consensus disorder prediction 1 63 - -
Aip10g03304 677 Pfam Initiation factor 2 subunit family 369 660 IPR000649 GO:0044237
Aip10g03304 677 SUPERFAMILY NagB/RpiA/CoA transferase-like 328 670 IPR037171 -
Aip10g03304 677 MobiDBLite consensus disorder prediction 37 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03304 Aip-Chr10 131408212 131413993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03304 4 677 Eukaryotic Initiation Factors Gene Family AT5G38640 63.889 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03304 K03680 - gmx:100775998 1027.7