Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03298 ATGGGTGAAGAGAGAGAAGATCCACAGAAGATTAAGCGAATAGCGGCGGATTCATACGACTACGACAACGACCCCAGATGGCAAGATTACTGGTCCAACGTCCTCATCCCTCCTCACATGGCCTCTCGAAACGACGTCGTTTCGCATTACAAGCGCAAGTTCTACCAGCGCTACCTTGATCCTGATCTGGTTGTGGAACCAATGTCGGCTTCTGGTTCATCCCAGCCAGCACGAACCTCAACAGCATCAACATCGCCATCCGGAGCAAATGAACCAACCCGCAGAAGAAGCTCTGGATCAACTGATAGAACTTCAGGGACATCCACAACTGCAGGTTCCGGTCCAACTTCTCTGCAATGGGATCGACAGATGATTCTGTTTTCTGTTAATGCTTGGGTATTTGTTGTGGCTGTTGTTGCAGCCATCCCATTGGTACCTACTTATCTTTCTCATAGGGCTTATCGACTTTCTTTTATGGGTACTACTTGCTCTGCTCTGTTCTCATTGTACTCGCAACATGGGAAACCAAGAGCATGGAATATGCAGGCCTTGCAAGTTTACTTTCAATCCATAATTGCTTCAAAAAATTTTATATACTTCCTCTACTCCCTTACATTCGTTACATCACAACTTTGTCTAAAATTTGCTTTGATCCCCATCATATGTTGGGCATTTGAACATGTAGCAAAGTTCCTTAGGCGTAATTTCAGCCGCTCCACCTTGTACAGGAAGTACTTGGAAGAGCCCTGTGTTTGGGTAGAGTCAAACAGTACTACTCTCAATATACTAACATCACATGTTGAGATTGGACTTGGATTCTTGCTGATTTTCTCACTGTTCTCGTCACAGCGTAATGTAATACAGACATTCATGTACTGGCAGCTGTTAAAGCTCATGTATCATGTTCCAGTTACTGCCGCATATCATCAGAGTGTTTGGGCTCAAATCGGGAGGTCGATCAATCCATACATCCATCGTTATGCACCATTCTTGAAGACTCCAATATCTGCAGCCCAAAGATGGTGGTTAAGATTTAATTTTCTTGTAAAAACATGTCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCCGCCGAGCCGCTGAACTCCGAGCCGGAAATTGACACAGCTCCGACCAACAAAACCCGCCGCCTCGCCGGAAAAAACGGCCTCCGCCACCGCCCTACTCGCCAACGATCTCTCACCAGAGACATCGGTCACGTCGCCGCCGAAACCTACTTGGTCACTAGCCTCACATTCACGCTTCTTCAGTATCTCGGGATTGGTTACCGCTGGATTAAGCAATTACTTGCCCTTGGATGTTACGCCATGCTTCTTATGCCTGGATTTCTACAAGTTGCATACTATTATTACTTCACGAGCAAGGTAAAGCGAAGCATTGTTTATGGGGATCAACCAAGAAACAGGTTGGATTTGTATCTACCGGCTGATATTGATAAGCCCAAGCCAGTTTTGATATTTGTAACTGGAGGAGCATGGATTATTGGGTATAAAGCGTGGGGATCCCTTTTAGGACTACAGTTGGCAGAAAGAGACATTATAGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACAATCAGTGACATGGTAAATGATGCTTCTCAAGGAATCTCTTTTGTCATCAATAACATAACTAATTATGGAGGCGATCCTAATAGGATATATTTGATGGGGCAATCTGCTGGTGCTCATATTTCTTCTTGTGCTTTACTGGATCAAGCAATCAAAGAAGTTGGAAAAGGAAATAAAGTTTCTTGGAGCATTTCCCAGCTAAAAGCTTATTTTGGTTTATCTGGAGGATATAACCTACTGGAATTAGTTGATCACTTCCACAATCGTGGCTTGTATCGTTCTATTTTTCTAAGTATCATGGAAGGTGAAGAATCTTTGAAGATATTTTCTCCTGAAATCAAAATTCAAGATCCATGCATCAAAGAATCTATTCCTCTCTTGCCTCCTATATATCTGTACCATGGAACTGCTGACTATTCCATACCATCAGTTGCAAGTGAACGGTTTGCCGAAGCTCTTAAGAAGGCAGGAGCAAGTGTTGAGCTGATTCTCTATGATGGGAAAACTCATACAGATTTGTTCCTCCAAGATCCGTTGCGAGGCGGCAAAGACGACCTATTTGATCATGTAGTTTCTGTGATACATTCCAATGACAAAGATGCTGTTGCAAAGGGTACAACTGCAGCACCAAGAAGAAGATTTGTTCCTGAGATTTTATTACAGATGGCTCGCAAGATCAGTCCCTTCTAA 2328 0.4227 MGEEREDPQKIKRIAADSYDYDNDPRWQDYWSNVLIPPHMASRNDVVSHYKRKFYQRYLDPDLVVEPMSASGSSQPARTSTASTSPSGANEPTRRRSSGSTDRTSGTSTTAGSGPTSLQWDRQMILFSVNAWVFVVAVVAAIPLVPTYLSHRAYRLSFMGTTCSALFSLYSQHGKPRAWNMQALQVYFQSIIASKNFIYFLYSLTFVTSQLCLKFALIPIICWAFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNSTTLNILTSHVEIGLGFLLIFSLFSSQRNVIQTFMYWQLLKLMYHVPVTAAYHQSVWAQIGRSINPYIHRYAPFLKTPISAAQRWWLRFNFLVKTCHXXXXXXXXXXXXXXXXXXXXXXXSAEPLNSEPEIDTAPTNKTRRLAGKNGLRHRPTRQRSLTRDIGHVAAETYLVTSLTFTLLQYLGIGYRWIKQLLALGCYAMLLMPGFLQVAYYYYFTSKVKRSIVYGDQPRNRLDLYLPADIDKPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIIVACIDYRNFPQGTISDMVNDASQGISFVINNITNYGGDPNRIYLMGQSAGAHISSCALLDQAIKEVGKGNKVSWSISQLKAYFGLSGGYNLLELVDHFHNRGLYRSIFLSIMEGEESLKIFSPEIKIQDPCIKESIPLLPPIYLYHGTADYSIPSVASERFAEALKKAGASVELILYDGKTHTDLFLQDPLRGGKDDLFDHVVSVIHSNDKDAVAKGTTAAPRRRFVPEILLQMARKISPF 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03298 775 MobiDBLite consensus disorder prediction 1 24 - -
Aip10g03298 775 Gene3D alpha/beta hydrolase 469 724 IPR029058 -
Aip10g03298 775 MobiDBLite consensus disorder prediction 68 115 - -
Aip10g03298 775 Pfam Transmembrane protein 33/Nucleoporin POM33 123 302 IPR005344 GO:0016021
Aip10g03298 775 Coils Coil 377 379 - -
Aip10g03298 775 MobiDBLite consensus disorder prediction 371 406 - -
Aip10g03298 775 MobiDBLite consensus disorder prediction 66 115 - -
Aip10g03298 775 Pfam BD-FAE 490 699 - -
Aip10g03298 775 MobiDBLite consensus disorder prediction 1 26 - -
Aip10g03298 775 SUPERFAMILY alpha/beta-Hydrolases 466 747 IPR029058 -
Aip10g03298 775 PANTHER OS01G0604700 PROTEIN 6 344 - -
Aip10g03298 775 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 6 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03298 Aip-Chr10 131274053 131290205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03298 402 775 Carbohydrate Esterase AT1G26120 66.310 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03298 K15889 - gmx:100788814 649.818