Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03296 ATGAGTGAATACAGGCAGTATGTTCAATTTCACGACACAAATGAAAAGAAGAGAAATATACACCTAGAGGTGATTAGAGGCGGGAGAAGGATTAAGATCTCAATTTATGATATTGTCGTTGGCGATGTTATACCCCTTAATACTGGTGACCAGGTCCCAGCTGATGGAATTCTAATCACTCCTCACCTTGCAATTGATGAATCAAGCATTCATGGGGAGAGCACAGTTGTTCATAAAAATTCTAGGGCCCCTTTCTTGATGTCTGGATGTAAAGTTGACGATGGTAGTGGCACTATGCTGGTAATAGGTGTTGGCATTAATACTGAGTGGGGTTTACAAATGGCTATTTCTTCAGATGACCCAATTGAAGAAACACCTTTGCAGGCTCGTCTAAATGGTGTAGCCACCTTGTTTGGTATTGTTGGTCTCTCTGTCACAGCCGTTATTCTGACGGTACTGCTGGCCAGATACTTCACTGGCCATACCAGAAACTTAGATGGGAATGTTCAATTTATAGCGGGCAAGACTAGAACTGTTGATGCTATACATGGAGCAGTTAGCATAGTAACAATTGCGGTCACCAGTATAGTGGTTGCAGTACCTGACAGCCTCCCATTAACAGTCAACTTCGCGTTAGCCTTCTCATTAAGGAAACTGATGGCATCTAAGATTTTGGTGAGGAAGCTTTTTGCTTGCGAGATGATGGGCTCTGCCACAGTTATTTGTAGTGACAAGAGTGGCACATTGACTATGAATCAGATGATTGTGGTTGAGGCATATGCTGGTGGTAGAAAAATTGATCCTCCTAGCAACGGGTTAAGAATCTCTCCCAAGCTCCAATCGTTGCTCATTGAAGGTGTTGCACAAAACACTAATGGCAATGTTTACTTACCTGAGGGTTGCACTGGTATTGAGATTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAGTACAGATTGGGATGGATTTCGAGGCTGCCAGATCAGAGTCTTCAATTATTCACATGTTTCCTTTCAATGCAGAGAAAAAACGTGGCGGAGTTGCAATACAGAAGGCTGACCATGAAATCCACATACATTGGAAAGGTGCTGCTGAGATAATTCTTGCTCGTTGTACATGGTACTTGGATACAAATGACCATTTGATGGAGATGAATGAAGAGAAGATGGCATTTTTCAATCAAATTATTGAAGACATGGCTGCTAAAAGTCTTCGTTGTGTTGCTATTGCATATCGACCATGGAAAAAGGAGGACATTCCAGTCAATGAAGAACAATGGGCTCACTCGTCTATACTAGAAGATGATCTTATTTTGCTTGCTATTGTTGGTATAAAGGATCCTTGTCGACCTGGAATAAAAACTACAGTGCAGCTTTGCCAAAATGCTGGGGTTAAGGTGATAATGTTCACTGGTGACAACATCAATACTGCCAAAGCAATTGCTTTGGAATGTGGAATACTATCTTCCTTTGATAATGCTATAGAACCATGTGTCATTGAGGGAAGAGAATTCCGTGCCTTAACAGATGAACAAAGAGAAGAGATAGCTGAAAAAATAGTTGTTATGGGACGTTCAAGTCCTAATGACAAGTTATTACTTGTGGAAGCGCTCAGAAAGAGGGGACATATTGTTGCTGTAATTGGGGATGGAACAAATGATGCTCCGGCACTATATAAGGCCGATGTAGGTCTTGCAATGGGTATACAGGGCTCACAAATTGCAAAAGAAAGCTCTGATATCATACTTATGGATGACAACTTTGCTTCAATTTTGAAGGTTGTGAAATGGGGTCGATGTATATATGCTAACCTACGGAAATTTATCCAATTTAATCTTACAATAAGTGTGACAGCTCTTCTTATAAATGTTGTTACTACACTCTCTTCTGGTGATATCCCACTAAATGCTGTGCAGCTTCTGTGGGTAAATCTTATCATGGATACTCTAGGAGCACTAGCATTGGCAACTGAACAACCAACGAATCTCCTGATGAATCTACCTCCAGTAGGCCGAAGAGAACCGTTAATCTCAAATACTATGTGGAGGAACATATTGATACAGGTAGTATATCAGGTGTCTGTCTTGCTCGCTCTAAACTTTCAAGGTAGCATTCCGGGTTTCACACATGATGCAACTGATCATGGGATTAAATTGAAGAAAACATTGATCTTCGATGCATTTGTACTATGTCAGATCTTCAATGAATTTAATGCAAGGAAGCTAGATGAATTCAACATATTTAAAGGAGTCACGAGAAACTACCTCTTTATGGGAATAATAGGCTTGACAGTTGTGCTTCAGTTTATCATCGTTGAATTCCTCGGAAAATTCACTTCCACAGTCAGGCTTAATTGGAAGCAGTGGTTCATCTGTGTCATTATTGGCTTTATTAGTTGGCCTCTTGGTTGTTTTGGGAAATTGATACCAGTGCCACACACTCCCATCAATAATAAATTTAGAAGAATTCTTCATGGAAGAACTCAAATGCAAAGTGGTCAGAGTACAACAGGAGAAAGACCGTACTCAAAACTAGTTATATGTTGCTATTTGATTGTAAATTTATTTTCAAGATTTCAACGTCGAAGAACATCAACGCACCAGGTTCTATACTGTAGTGCAGTCACATGTTTTGTTTATTATCAAGATTTTCAAATCAACCGTTAA 2673 0.4007 MSEYRQYVQFHDTNEKKRNIHLEVIRGGRRIKISIYDIVVGDVIPLNTGDQVPADGILITPHLAIDESSIHGESTVVHKNSRAPFLMSGCKVDDGSGTMLVIGVGINTEWGLQMAISSDDPIEETPLQARLNGVATLFGIVGLSVTAVILTVLLARYFTGHTRNLDGNVQFIAGKTRTVDAIHGAVSIVTIAVTSIVVAVPDSLPLTVNFALAFSLRKLMASKILVRKLFACEMMGSATVICSDKSGTLTMNQMIVVEAYAGGRKIDPPSNGLRISPKLQSLLIEGVAQNTNGNVYLPEGCTGIEISGSPTEKAILHWGVQIGMDFEAARSESSIIHMFPFNAEKKRGGVAIQKADHEIHIHWKGAAEIILARCTWYLDTNDHLMEMNEEKMAFFNQIIEDMAAKSLRCVAIAYRPWKKEDIPVNEEQWAHSSILEDDLILLAIVGIKDPCRPGIKTTVQLCQNAGVKVIMFTGDNINTAKAIALECGILSSFDNAIEPCVIEGREFRALTDEQREEIAEKIVVMGRSSPNDKLLLVEALRKRGHIVAVIGDGTNDAPALYKADVGLAMGIQGSQIAKESSDIILMDDNFASILKVVKWGRCIYANLRKFIQFNLTISVTALLINVVTTLSSGDIPLNAVQLLWVNLIMDTLGALALATEQPTNLLMNLPPVGRREPLISNTMWRNILIQVVYQVSVLLALNFQGSIPGFTHDATDHGIKLKKTLIFDAFVLCQIFNEFNARKLDEFNIFKGVTRNYLFMGIIGLTVVLQFIIVEFLGKFTSTVRLNWKQWFICVIIGFISWPLGCFGKLIPVPHTPINNKFRRILHGRTQMQSGQSTTGERPYSKLVICCYLIVNLFSRFQRRRTSTHQVLYCSAVTCFVYYQDFQINR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03296 890 Pfam haloacid dehalogenase-like hydrolase 240 564 - -
Aip10g03296 890 Gene3D - 22 118 - -
Aip10g03296 890 PRINTS Sodium/potassium-transporting ATPase signature 235 256 - -
Aip10g03296 890 PRINTS Sodium/potassium-transporting ATPase signature 361 379 - -
Aip10g03296 890 Pfam E1-E2 ATPase 21 220 - -
Aip10g03296 890 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 249 447 IPR023299 GO:0000166
Aip10g03296 890 SUPERFAMILY HAD-like 240 655 IPR036412 -
Aip10g03296 890 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 2 813 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aip10g03296 890 PANTHER CATION TRANSPORTING ATPASE 1 830 - -
Aip10g03296 890 SUPERFAMILY Calcium ATPase, transduction domain A 21 111 IPR008250 -
Aip10g03296 890 Gene3D - 239 595 IPR023214 -
Aip10g03296 890 Gene3D - 119 800 - -
Aip10g03296 890 Gene3D - 252 450 IPR023299 GO:0000166
Aip10g03296 890 PRINTS P-type cation-transporting ATPase superfamily signature 66 80 - -
Aip10g03296 890 PRINTS P-type cation-transporting ATPase superfamily signature 242 256 - -
Aip10g03296 890 PRINTS P-type cation-transporting ATPase superfamily signature 443 454 - -
Aip10g03296 890 PRINTS P-type cation-transporting ATPase superfamily signature 465 475 - -
Aip10g03296 890 PRINTS P-type cation-transporting ATPase superfamily signature 550 569 - -
Aip10g03296 890 PRINTS P-type cation-transporting ATPase superfamily signature 574 586 - -
Aip10g03296 890 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 516 629 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03296 890 Pfam Cation transporting ATPase, C-terminus 635 810 IPR006068 -
Aip10g03296 890 PANTHER CALCIUM-TRANSPORTING ATPASE 1 830 - -
Aip10g03296 890 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 813 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03296 Aip-Chr10 131239235 131261330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03296 1 838 Primary Pumps ATPases AT5G57110 63.626 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03296 K01537 - gmx:100792945 1216.45