Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03269 ATGGGGTTCTCAAGAACTGCAGAATCTGCACTTCTTCTTGTGGCATTCTTCTGTCTTCTGAGATCTGCACATGCTTTACTTTCTCCCAAAGGAATCAACTTTGAAGTGCAAGCTTTAATGGCCATAAAAGCTTCTCTAGTGGACCCTCATGGCATTTTGGACAATTGGGATGGAGATGCAGTTGATCCATGTAGCTGGAACATGGTCACATGTTCTCCTCAGAGCTTTGTCATTAGCTTAGGAATTCCAAGTCAGAATTTATCTGGTACTCTATCACCAAGCATTGGAAACCTAACAAACCTTCAGAGTGTTGTGCTGCAAAATAATAACATAACTGGACCAATCCCTTCAGAGCTAGGCAAACTTTCCATGCTTCAAACACTTGATCTCTCTAATAACTTCTTTAATGGGGAAATTCCTCAATCTCTTGGTCATCTCAGAACACTTCAGTACTTGAGGCTTAATAATAACAGTTTTTCTGGGGAATGTCCTGTGTCAGTGGCTAACATGGCTCAGCTTTCTTTTCTTGACTTGTCCTACAATAATCTAAGTGGATCTGTACCAAGAATTTTGGCCAAATCATTCAGCATTGTTGGAAACCCCCTTGTATGCACAACAGGAAAAGAAACAAACTGCCATGGAATGACACTGATGCCTATGTCCATGGACTTAAACACTACTCAGAGCGCTTCACCATCAGGCACACATAAAACTCACAAAATCGCCATCGCTTTCGGCTTAAGTCTTGGATGCCTCTCCTTTATAGCTCTTGTCTTTGGACTTGTTATATGGTGGAGGCGCAAGCACAACAAGCAGGCATTCTTTGATGTCAAAGACCGGCACCATGAAGAAGTGTACCTTGGAAACCTGAAGAGGTTCCAATTAAGAGAACTTCAGATTGCTACAAACAACTTCAGCAACAAGAACATACTGGGAAAGGGTGGTTTTGGAAATGTGTACAAAGGAAGACTTCAAGATGGGAGTGTTGTAGCTGTGAAGAGGCTGAAAGATGGGAATGCAATTGGAGGGGAGATTCAGTTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTGCACAGAAACCTCCTTAAACTTTATGGATTTTGTGTTACACCAACAGAAAGGCTTTTGGTTTATCCCTACATGTGCAATGGGAGTGTTGCTTCACGTCTGAAAGGAAAGCCAACATTGGAGTGGGGAACAAGGAAGCAAATAGCATTAGGGGCAGGAAGAGGATTGCTGTACCTTCATGAGCAGTGTGATCCAAAAATAATCCACAGGGATGTGAAAGCTGCAAACATATTACTTGATGAGTATTGTGAAGCAGTTGTTGGTGATTTTGGGTTGGCAAAGCTTTTGGATCACAAAGACACACATGTCACAACTGCTGTCAGGGGTACTGTGGGACACATTGCACCGGAATATCTCTCCACAGGTCAGTCCTCTGACAAAACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAATTGATCACTGGCTTGAGGGCTTTGGAGTTTGGCAAGGCTGCTAACCAAAAAGGTGCTATGCTTGATTGGGTAAGCAAAATTCACAAGGAGAAGAAGCTTGAATTACTTGTAGACAAGGATCTAAAGAACAACTATGACAGGATTGAGCTTGAGGAAATTGTAAAGGTAGCTCTATTGTGCACACAATATCTTCCGGCCCACAGGCCCAAGATGTCTGAAGTTGTGCGCATGCTTGAAGGTGATGGGCTTGCAGAGAAATGGGAAGCCTCACTAAGTGCCCATGACACAACAAAGCCCAACAAAGCCCATGAGTTCTCTTATTCAGATCGTTACTCTGATCTCACTGATGACTCTTCTTTGTTGGCCCAAGCTATGGAACTCTCCGGCCCAAGATGA 1884 0.4321 MGFSRTAESALLLVAFFCLLRSAHALLSPKGINFEVQALMAIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPQSFVISLGIPSQNLSGTLSPSIGNLTNLQSVVLQNNNITGPIPSELGKLSMLQTLDLSNNFFNGEIPQSLGHLRTLQYLRLNNNSFSGECPVSVANMAQLSFLDLSYNNLSGSVPRILAKSFSIVGNPLVCTTGKETNCHGMTLMPMSMDLNTTQSASPSGTHKTHKIAIAFGLSLGCLSFIALVFGLVIWWRRKHNKQAFFDVKDRHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGNVYKGRLQDGSVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCVTPTERLLVYPYMCNGSVASRLKGKPTLEWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHKDTHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVSKIHKEKKLELLVDKDLKNNYDRIELEEIVKVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASLSAHDTTKPNKAHEFSYSDRYSDLTDDSSLLAQAMELSGPR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03269 627 SUPERFAMILY L domain-like 35 307 - -
Aip10g03269 627 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Aip10g03269 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Aip10g03269 627 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 6 627 - -
Aip10g03269 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 627 - -
Aip10g03269 627 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Aip10g03269 627 Pfam Protein kinase domain 306 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03269 627 Gene3D Transferase(Phosphotransferase) domain 1 382 593 - -
Aip10g03269 627 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Aip10g03269 627 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Aip10g03269 627 ProSiteProfiles Protein kinase domain profile. 305 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03269 627 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Aip10g03269 627 SMART serkin_6 305 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03269 627 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03269 Aip-Chr10 130908369 130912565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03269 7 627 Receptor kinase-like Gene Family AT5G16000 74.641 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip10g03269 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03269 - - gmx:100806650 1051.97