Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03264 ATGAGTTTACTCACAAACATGGAGCGCATTGAGTCATTATTCAACGCACCAAACACCAAGAAAAAGTGGCACTCTGCTTTCTTAGTCATATATTGTTCTCGAGCCCTCGCGTCACACTTCACTCTCAACAACAAAACCAAACAAAGGAAAATCAATCCTTCTCCATCATTCACCGTCATTGATTTGAATCCGCAACAACCCTTCGCAATTGATCAAACCACCCTAACCACCATCGTCAAAGAAAAAGACCATGCTACCCTCAAGAAACACGGCGGCATTGAAGGCATAGCTAAATCCCTTGAAACCGACATCGAACATGGCATCAAAGGCGATGAAGACATGTCACGCAGACGCCACATATTCGGCTCCAACACTTACCCAAAGCCACGTTCTAAAAGCTTCGTTCATTTCGTATTGGAAGCTTTCAAAGATGTCACCATTCTCATCCTTTTGTGCTGCGCAGCGCTTTCTCTCGGCTTCGGAATCAAGCAACATGGACTCAAAGAAGGTTGGTACGACGGTGGAAGCATCTTCCTTGCTGTGTTCATTGTCATTTCTCTCTCTTCCATAAGCAATTTCAGACAGAATAGGCAGTTTGACAAATTGTCTCAGCTCAGCAACGATATACAAATCGATGTGGTGAGACTCGGAAGGCGGCAACAGGTTTCGATCTATGATATCGTCGTCGGCGACGTTGTTTGCTTGAAGATCGGCGATCAAGTCCCCGCCGACGGGCTATTCGTCGACGGACACTCGCTGCGAATCGACGAATCAAGCATGACTGGGGAGAGCGACCATGTGGAAGTTGGAAAGGTTCATAATCCGTTCTTGTTCTCCGGAACGAAAGTGGTTGACGGTTACGCGAAAATGATGGTTACTTCCGTTGGAATGAAGACTACATGGGGTCAAATGATGAGCTCGATTAGCCGCGACGTTAACGAGGAAACGCCGTTACAAGCTCGCCTTAACAAACTAACTTCATCAATCGGAAAGGTTGGTTTGGCAGTTGCTTTTCTTGTTCTTGTTGTTCTTCTTATCCGTTACTTCACGGGGAACACAAAAGATGAAAATGGAGTGAAAGAGTTCAACGGGAGCAAGACTAAGTTCAGTGATATAATGAACTCTGTCGTCGGAATTGTGGCTGATGCAGTCACCATTGTGGTTGTTGCAATCCCTGAAGGGTTGCCGTTGGCGGTTACGTTGACTTTGGCTTATTCCATGAAGAAAATGATGGCGGATAAAGCTATGGTGAGGAAGCTCTCAGCGTGTGAGACTATGGGTTCTGCTACAACTATTTGCACAGATAAAACAGGAACACTCACACTCAACGAAATGAGAGTCACAAAGTTTTGGATGGGATTAGAACCTGTGTTGGAGAATGCGTATTCATCGGTTGCGCCTTTTGTTCTTCAATTGATCCAGGAAGGAGTGGCTTTGAACACAACTGGTAGCGTTCACAAGTCGAAATCTGAATCCGATTTCGAGTTTTCCGGTAGTCCTACCGAGAAAGCGATCCTCTCTTGGGCGGTTTTGCAGTTGGATATGAAGATGGATGAATTGACGAAAGGATGCTCCATAATTCAGGTTGAGACCTTCAACTCGAAGAAGAAACGGAGCGGAGTTTTGTTGCGAAGGAAATCGGACAACACGGTGAATGTGCACTGGAAAGGCGCTGCTGAAATGGTACTGAAAATGTGTTCAAAATACTACGATGCTTCTGGAATTTTGAAAGATCTTGACAGCGAAATCATGATGAAATTCGAGAACATCATTCAAGGAATGGCAGCTAGTAGTCTTCGCTGTATCGCTTTTGCTCAAACGGAGGTTTCAGATTCAGAGATAGAGGTTGAAGACGGAGAGGGAAAAGCTATGGTGAAAGAAAATGGATTGACTCTACTAGGACTAGTCGGAATCAAGGATCCGTGCCGGCAGGGGGTGAAGAAGGCGGTGGAGTCTTGCCAGAACGCCGGAGTAAATGTGAAGATGATCACAGGGGACAATGTTTTCACTGCAAGAGCAATAGCAACAGAATGCGGCATACTGAGACAAAATCAAGACATGGCTGGCGCGGTGGTGGAAGGCGAGGAGTTTCGCAACTACACGCCGGAGGAAAGGTTAGAGAAAGTGGACAAAATATGCGTGATGGCGAGATCCTCGCCGTTCGACAAGCTCCTGATGGTAGAGTGCCTAAAACAGAAAGGTCACGTGGTTGCCGTGACAGGGGACGGCACGAACGACGCGCCGGCACTGAAGGAAGCTGACATTGGACTCTCCATGGGGATCCAAGGCACAGAGGTGGCGAAAGAGAGCTCTGATATTGTGATTTTAGACGACAATTTCGCCTCCGTCGTAACGGTTTTGAGGTGGGGAAGGTGTGTTTATAACAACATTCAGAAGTTCATACAGTTCCAATTGACCGTGAATGTTGCTGCACTTGCAATAAACTTCGTGGCGGCGGTGTCGGCCGGCGAAGTTCCTCTCACGGCAGTGCAACTTTTATGGGTGAATTTGATCATGGACACGTTGGGAGCATTGGCACTTGCAACGGAAAAGCCTACTTTGGAGTTAATGGAGAAACCGCCGGTTGGGAGAACAAAACCTCTCATAACAAACGTGATGTGGAGGAATCTTATGGCACAAGCTTTGTACCAAATTGCGGTTTTGTTGACTCTTCAGTTCAGAGGTGAGTCTATCTTTGGTGTTACTAAAGGGGTTAATGACACTCTGATTTTCAACACTTTTGTTATGTGTCAAGTTTTCAATGAGTTCAATGCAAGGAAATTGGAGAAGAGGAATGTTTTTAAGGGGTTACATAGGAGCAAGTTGTTCTTGGGGATTATTGGTGTGACAGTGGTACTCCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTGATACTGAGAGGCTGAATTGGGGGCAATGGGGTCTTTGCATTCTTCTTGGTGCTGCTTCTTGGCCAATTGGTTGGGTTGTGAAGATGATTCCAGTTCCAGAAAAGCCATTTCTTGATTTCCTGAGTATCAAGAAATGA 3033 0.4593 MSLLTNMERIESLFNAPNTKKKWHSAFLVIYCSRALASHFTLNNKTKQRKINPSPSFTVIDLNPQQPFAIDQTTLTTIVKEKDHATLKKHGGIEGIAKSLETDIEHGIKGDEDMSRRRHIFGSNTYPKPRSKSFVHFVLEAFKDVTILILLCCAALSLGFGIKQHGLKEGWYDGGSIFLAVFIVISLSSISNFRQNRQFDKLSQLSNDIQIDVVRLGRRQQVSIYDIVVGDVVCLKIGDQVPADGLFVDGHSLRIDESSMTGESDHVEVGKVHNPFLFSGTKVVDGYAKMMVTSVGMKTTWGQMMSSISRDVNEETPLQARLNKLTSSIGKVGLAVAFLVLVVLLIRYFTGNTKDENGVKEFNGSKTKFSDIMNSVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADKAMVRKLSACETMGSATTICTDKTGTLTLNEMRVTKFWMGLEPVLENAYSSVAPFVLQLIQEGVALNTTGSVHKSKSESDFEFSGSPTEKAILSWAVLQLDMKMDELTKGCSIIQVETFNSKKKRSGVLLRRKSDNTVNVHWKGAAEMVLKMCSKYYDASGILKDLDSEIMMKFENIIQGMAASSLRCIAFAQTEVSDSEIEVEDGEGKAMVKENGLTLLGLVGIKDPCRQGVKKAVESCQNAGVNVKMITGDNVFTARAIATECGILRQNQDMAGAVVEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVECLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTLELMEKPPVGRTKPLITNVMWRNLMAQALYQIAVLLTLQFRGESIFGVTKGVNDTLIFNTFVMCQVFNEFNARKLEKRNVFKGLHRSKLFLGIIGVTVVLQVVMVEFLKKFADTERLNWGQWGLCILLGAASWPIGWVVKMIPVPEKPFLDFLSIKK 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03264 1010 Gene3D - 430 785 IPR023214 -
Aip10g03264 1010 SFLD p-type atpase 415 793 IPR044492 -
Aip10g03264 1010 PANTHER CALCIUM-TRANSPORTING ATPASE 12 984 - -
Aip10g03264 1010 PANTHER CATION TRANSPORTING ATPASE 12 984 - -
Aip10g03264 1010 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 997 IPR023298 -
Aip10g03264 1010 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 440 638 IPR023299 GO:0000166
Aip10g03264 1010 SUPERFAMILY Calcium ATPase, transduction domain A 210 307 IPR008250 -
Aip10g03264 1010 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 81 997 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aip10g03264 1010 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 713 821 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03264 1010 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 374 455 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03264 1010 SFLD Haloacid Dehalogenase 415 793 - -
Aip10g03264 1010 Pfam Cation transporter/ATPase, N-terminus 90 157 IPR004014 -
Aip10g03264 1010 SMART Cation_ATPase_N_a_2 89 162 IPR004014 -
Aip10g03264 1010 SUPERFAMILY HAD-like 431 845 IPR036412 -
Aip10g03264 1010 Pfam haloacid dehalogenase-like hydrolase 430 754 - -
Aip10g03264 1010 Pfam Cation transporting ATPase, C-terminus 825 995 IPR006068 -
Aip10g03264 1010 Gene3D - 443 641 IPR023299 GO:0000166
Aip10g03264 1010 ProSitePatterns E1-E2 ATPases phosphorylation site. 435 441 IPR018303 -
Aip10g03264 1010 CDD P-type_ATPase_Ca_PMCA-like 115 873 - -
Aip10g03264 1010 PRINTS P-type cation-transporting ATPase superfamily signature 256 270 - -
Aip10g03264 1010 PRINTS P-type cation-transporting ATPase superfamily signature 433 447 - -
Aip10g03264 1010 PRINTS P-type cation-transporting ATPase superfamily signature 634 645 - -
Aip10g03264 1010 PRINTS P-type cation-transporting ATPase superfamily signature 656 666 - -
Aip10g03264 1010 PRINTS P-type cation-transporting ATPase superfamily signature 740 759 - -
Aip10g03264 1010 PRINTS P-type cation-transporting ATPase superfamily signature 764 776 - -
Aip10g03264 1010 PRINTS H+-transporting ATPase (proton pump) signature 587 605 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03264 1010 PRINTS H+-transporting ATPase (proton pump) signature 740 756 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03264 1010 PRINTS H+-transporting ATPase (proton pump) signature 772 797 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03264 1010 Pfam E1-E2 ATPase 210 411 - -
Aip10g03264 1010 Gene3D - 112 309 - -
Aip10g03264 1010 Gene3D - 140 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03264 Aip-Chr10 130810780 130814154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03264 10 1010 Primary Pumps ATPases AT3G22910 68.540 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03264 K01537 - gmx:100793918 1660.2