Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03251 ATGTCATCGCGATTCCTTTCCTGCTTTCGGCCATCCCACACTTTCCGTAATTGTCCTCCACCACCGGCGCCACCAGGCCCCTCCAACCCCAACCTGACCACGTACCTGTACCACACCGACATGGGCCTCGTGACTCTAACATGGTCACGCTCTAACTTAGGCCGCTCCCTCCACGTCCACGTCCACAACCACAACCCCTTCGATGCCCCTCCTCCTTATAAAGCCCTTCATATTCTAGAAGAAGCACGGATCCAAAACCCTCTCTTCCACCACGCGACTCTTCTGGAACCTCTCCAAGGCCAAGTTCTCTTCCTTCTTCTCCCCCGAACCCCACTCCTCCTTCTACCTCGCTCTCGTCGTCCACAACCGCATCGTTCTCCTCCTTGGCGATTCCCCCAAAGACGCCTACTCCAAGTATTGGAGGCAAGAGCTGGGTTCTATGAAAAGCCAATTACTACAATAGATTTTGCATCACTATATCCATCTATTATGGTGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAATTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGTCTGTTGCTTTTAG 633 0.4992 MSSRFLSCFRPSHTFRNCPPPPAPPGPSNPNLTTYLYHTDMGLVTLTWSRSNLGRSLHVHVHNHNPFDAPPPYKALHILEEARIQNPLFHHATLLEPLQGQVLFLLLPRTPLLLLPRSRRPQPHRSPPWRFPQRRLLQVLEARAGFYEKPITTIDFASLYPSIMVAYNLCYCTLVTPEDVRKFNLPPESVNKTPSGETFVKSNLQKVCCF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03251 210 Pfam DNA polymerase family B 138 205 IPR006134 GO:0000166|GO:0003677
Aip10g03251 210 Gene3D Palm domain of DNA polymerase 139 208 IPR023211 -
Aip10g03251 210 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 139 206 - -
Aip10g03251 210 SUPERFAMILY DNA/RNA polymerases 139 202 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03251 Aip-Chr10 130657986 130659772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03251 139 206 Core DNA Replication Machinery Family AT5G63960 86.765 1.77e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03251 K02327 - aip:107619773 137.502