Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03236 ATGGAGCCATGGTGGAATGTGGCTGTCAAGGAACAGGCAATGGATCGCGTCCATTGCATTAGACAGAAAGAGGCTGTGAGGATTGTTAGATTGGTTGTTCGGGATAGCATTGAGGAAAAGATGCTGATGTTACACGAGGAGAAGAGGGGAAGTCATTCTATGGACGTAAGGAAATTTAGATCTTTATACTTCAGGCTACAAAATGACTTCTTCTCCTCCTGCAACATCAGCATCTTTTTCTCAATGCTATCCCGAACAACCAATCTAACAATCCTCACAGCCTCTTTTTGTCTAATGCAATGGACACGATCCATTGCCTCTTCCTGGACAGCCACATTCCATCATAGCTCCATGAAATACACCGTGGTGGTGGTCGTGATATTTACACCTGCACCTGAAACCCTAAGGCCCCTGCAAGCAGAACGGTCTGTCCATTTTCTTTAG 444 0.4527 MEPWWNVAVKEQAMDRVHCIRQKEAVRIVRLVVRDSIEEKMLMLHEEKRGSHSMDVRKFRSLYFRLQNDFFSSCNISIFFSMLSRTTNLTILTASFCLMQWTRSIASSWTATFHHSSMKYTVVVVVIFTPAPETLRPLQAERSVHFL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03236 147 Gene3D - 1 72 IPR027417 -
Aip10g03236 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 90 IPR027417 -
Aip10g03236 147 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 49 - -
Aip10g03236 147 PANTHER ATP-DEPENDENT DNA HELICASE (EUROFUNG) 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03236 Aip-Chr10 130467042 130467485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03236 2 49 RAD5 or RAD16-like Gene Family AT5G05130 54.167 1.38e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03236 K15711 K15083 aof:109849378 74.3294