Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03229 ATGCCTTCTTCGAATTCGAATAAGAAGAAGCACTCCAAGTCAAAGCACGAAGCTGCTTCTTCTGCACCACCGGTTACTCCTCCTCGAACGACGTCACGCCCCGACGACGAGGCCGACCTCGCCGCTTCTCTCTGCCTTCCAGAAGCTTCTCGAAGGTACCCTTCCTTCATCGGAGCATCTGCCTATGTCGGCCAAGTCTCCGCCGTTGATAATGCGCCTAATTCCAGGGACTCCAGAATCTGGCTCTCCGAACTTGCCATGGTTTCCTCTTCTCTTGCCCCTGGTACTCTTGTCTCGGTGTCAATTGCTTCATCAATGAACAGAAGTGTGCAATTGAATCCTCTCAAGTCATTAGTTGATGAATGTGTTAGATGCTACGGCTTGGAAACTGGGAAGACGTTGAAAGATGATGTCACAGGGAATTACTTTGTGCTTGCAACTGTTTTCCCTTCTACGAAGGTTTTGAAGAATGGAGTACGTCTGTCCTCAAATATTTCTTGTACAATGGGATGTCCTCCTTTGGGTACAATAGTGTTTGTTTACCCAGTACAGAAACAGTACTTATCTGGTCTTGCAAATGGGAGCAATGAACTGCATTATACAGAAAGTAATTGTCTCTCGATATATAATTGCAAGGAATTGTATCTACAGCTTGCTCCTCATAAGGATGGATTTCAATTGGACATTAATAACTCAGCCTCTGTGACGAAATCCCAAGTCCAGTCAGACAGTGATATTTTTGCATCTCCTAGCACACCTTCTAATGGATCAAAGTTTTCTAATGCTAGTGTGTTGTCTTCTCCAAGATTTGAAGATTCAGCATCAACTATACCCATTCAGAATAATCAATCTATGGCTTCATTCAATATTATGGATGCATTAGGAGATGAAAGTTCGAAAAAATTACTACAGGCATGTGCAACTTCATGGTTATATTCTCGTTATTTACTGCTAGGTAATTTTGTCTCTGTACCAATGTTTTCAGAGGTGTGCATTTTCCAAGTGATAGGAGCCAAAAAGGCACCAGTTGATAGAGCTGATAATTATTCATCAAATGGGATCAATAATTTGTGTCTTGAGGATTCTGATGTAGCAGAAAATGTGAATGAGGCAATCGTTGTCAATTGTGAAACAAAGGTATTTTTATCTTTGCAATCAAATGCAGCATCTAAAGAGTCAATTCAAAGGGATTTGCCCAGTGAAAAACGTAAAGCAGAGGTTGCTAATCCTAGCATATATGATAATATTTCTAAACTGGGTGGTCTATCTAAAGAATATTCAGTTTTAAAGGATATAATTTCTTCATCAGTAAAGGATGCTTTATCAAGTTTTGGTTTACGTATCACAAGAGGAGTTCTTCTACATGGTCCACCTGGTACAGGGAAGACTTCCCTTGCTCAATTATGTGCTCATGATGTTGGGGTAAATTTTTTCCAAATAAATGGACCTGAAATTGTTACCCAGTATTTTGGGGAAAGTGAGCAAGCATTGCATGAAGTTTTTGATTCAGCAATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGAAAAGATGGAGGTGAAGAGCTATCTCAAAGAATGGTTGCAACATTATTGAATTTGATGGATGGAATTAGTAGAACCGAAGGGTTGCTTGTAATTGCTGCCACCAACAGGCCTGATCATATTGAGCCAGCTCTCCGACGACCTGGAAGATTTGACAAAGAAATCGAAATTGGTGTGCCGTCCCCAAAACAACGCTTGGATATTTTGTTCACTCTTCTTTGTGGAGTGGATCATTCTCTCTCAGATTTACAAGTTGAACACCTTGCCACTGTCACTCATGGTTTTGTGGGCGCTGATCTGGCCGCCCTTTGCAATGAGGCGGCGCTGATTTGTCTAAGACGCTATGCTAATTTAAAGAAGAGTTGTGGTGATTCTTCCAATGATATAACAGAGCAACCCACATTGATGAATGGCGAAACAAACTCCAGAAATCAATCAGGTATTGCAACTTCATCTGTTTCAGAATCTGATACATCAGTGGCCTCCAATGCTGTATTACAGCTCTGCATGATGGACACAACTTCGGAATCTATGGAAATAATTTCTGATAGTGATAAAGACCACAATTTGAAAGTCAGTTTTGAAGATTTTCAGAAGGCTAGAATGAAAATAAGACCCAGTGCCATGCGAGAGGTAATCCTTGAGGTTCCAAAGGTCAATTGGGAAGATGTAGGTGGTCAAAATGAAGTCAAAGCTCAGTTAATGGAAGCTGTAGAGTGGCCCCAGAGGCACCGTGATGCGTTCAACCGTATTGGGACTCGCCCTCCTACAGGTGTATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGAGCAGTTGCATCTGAAGCTGGGCTGAACTTCCTAGCTGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCAGAGAAGGCTGTCAGATCATTGTTTGCAAAAGCAAGGACCAATGCCCCATCCATTGTATTTTTTGATGAAATTGATAGTCTTGCTGTAACCCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAATTGGATGGTCTGCATCAAAGAGTTAATGTCACTGTCATAGCTGCTACAAATAGGCCAGATAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGATCGCCTGCTTTATGTTGGACCTCCAAATGAGACAGACAGAGAAGATATATTTCGCATTCATTTGCGTAAAATTCCATGTGATTCTGATGTAAGCATTAAAGAACTTGCTCACCTCACAGATGGTTGTACTGGGGCTGACATATCACTAATATGTCGAGAGGCAGCCGTTGCAGCGATTGAGGAGAACCTTGGTGCTTCAGTTATATCAATGAAGCATTTAAAGAAGGCAATCAATCAGGTCCAGCCATCTGAAGTACAGTCCTACCAGAAGCTGTCAGCAAAGTTTCAAAGGGCTGTTCGCAGCTGTGATACAAATGAACTTGATCATATGCCGCACAAAAGTGGATATACTTCGTTCAACGTTCGCCTGTGTTCATATGGCTGCTGCTGGGTTCATTTGTTGAGGCATATGTGCACCACCAAGGCTTCAGATGACTGTACATATTGCTCTTTTTGGCTATCCAGTCTCAATGCCGCTTTGCTGGAGAATTTTGTATCCGCTACAGGTATCGTCACATCATGTAGATGA 3249 0.4229 MPSSNSNKKKHSKSKHEAASSAPPVTPPRTTSRPDDEADLAASLCLPEASRRYPSFIGASAYVGQVSAVDNAPNSRDSRIWLSELAMVSSSLAPGTLVSVSIASSMNRSVQLNPLKSLVDECVRCYGLETGKTLKDDVTGNYFVLATVFPSTKVLKNGVRLSSNISCTMGCPPLGTIVFVYPVQKQYLSGLANGSNELHYTESNCLSIYNCKELYLQLAPHKDGFQLDINNSASVTKSQVQSDSDIFASPSTPSNGSKFSNASVLSSPRFEDSASTIPIQNNQSMASFNIMDALGDESSKKLLQACATSWLYSRYLLLGNFVSVPMFSEVCIFQVIGAKKAPVDRADNYSSNGINNLCLEDSDVAENVNEAIVVNCETKVFLSLQSNAASKESIQRDLPSEKRKAEVANPSIYDNISKLGGLSKEYSVLKDIISSSVKDALSSFGLRITRGVLLHGPPGTGKTSLAQLCAHDVGVNFFQINGPEIVTQYFGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGISRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRLDILFTLLCGVDHSLSDLQVEHLATVTHGFVGADLAALCNEAALICLRRYANLKKSCGDSSNDITEQPTLMNGETNSRNQSGIATSSVSESDTSVASNAVLQLCMMDTTSESMEIISDSDKDHNLKVSFEDFQKARMKIRPSAMREVILEVPKVNWEDVGGQNEVKAQLMEAVEWPQRHRDAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARTNAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREDIFRIHLRKIPCDSDVSIKELAHLTDGCTGADISLICREAAVAAIEENLGASVISMKHLKKAINQVQPSEVQSYQKLSAKFQRAVRSCDTNELDHMPHKSGYTSFNVRLCSYGCCWVHLLRHMCTTKASDDCTYCSFWLSSLNAALLENFVSATGIVTSCR 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03229 1082 PANTHER AAA-FAMILY ATPASE 49 1012 - -
Aip10g03229 1082 ProSitePatterns AAA-protein family signature. 884 902 IPR003960 GO:0005524|GO:0016887
Aip10g03229 1082 Gene3D - 743 1014 IPR027417 -
Aip10g03229 1082 Pfam AAA+ lid domain 605 638 IPR041569 -
Aip10g03229 1082 Pfam AAA+ lid domain 936 982 IPR041569 -
Aip10g03229 1082 ProSiteProfiles EF-hand calcium-binding domain profile. 695 730 IPR002048 GO:0005509
Aip10g03229 1082 Pfam ATPase family associated with various cellular activities (AAA) 452 581 IPR003959 GO:0005524|GO:0016887
Aip10g03229 1082 Pfam ATPase family associated with various cellular activities (AAA) 782 913 IPR003959 GO:0005524|GO:0016887
Aip10g03229 1082 MobiDBLite consensus disorder prediction 649 677 - -
Aip10g03229 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 740 992 IPR027417 -
Aip10g03229 1082 PANTHER - 49 1012 - -
Aip10g03229 1082 CDD AAA 450 581 - -
Aip10g03229 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 639 IPR027417 -
Aip10g03229 1082 Gene3D - 915 1003 - -
Aip10g03229 1082 MobiDBLite consensus disorder prediction 1 39 - -
Aip10g03229 1082 Gene3D - 406 583 IPR027417 -
Aip10g03229 1082 CDD AAA 748 914 - -
Aip10g03229 1082 Gene3D - 584 742 - -
Aip10g03229 1082 SMART AAA_5 778 916 IPR003593 -
Aip10g03229 1082 SMART AAA_5 448 584 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03229 Aip-Chr10 130336036 130343924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03229 1 1008 Calmodulin-binding Proteins AT3G56690 57.281 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03229 - - gmx:100788600 1413.28