Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03228 ATGAGGGAAGAAGATTCAAACTGGTTTGCCAGATGGGAAGACGAACTACCTCCGCCGGAGGAACTCATGCCCTTATCGCAAACCCTAATCACACCCGATCTTGCCATCGCCTTTGACATCCCCAGTCCTCACACCCCAACCGCCGCCGCCACGGCCACCCCAACCACCCCGAACCACCACCTCCACCACCACCAACAACCACAGCAACCGCAACCACCTTCAAACCCTTCCCCCTCGCATCAGCAACAACCCTCCTCCGGCGGCGACTTTGCCGACTCCGGCGATCTTGGCTCCGGCGCCGCCGGTGAGGAGCCAGCCAGAACCCTCAAGAGGCCCCGCCTCGTTTGGACCCCACAGCTCCACAAGCGCTTCGTGGACGCCGTCGCACACCTCGGAATCAAGAACGCGGTTCCGAAGACCATAATGCAGCTCATGAGCGTTGACGGCTTAACCCGCGAGAACGTCGCCAGCCACCTCCAGAAGCCTAATTCAGAGCATTTCCTGCCGTTCGTGTCGGTACCGGCAATGCACCACCAGCAACACCACCACCAGATGGCTGCCGCAGCTGCCGGTGCTGCAGCGATGCAGCACGTCCAGCTGCAGCAGCAGTTCCATAGGCAGGCATCCGGGCATTTTGGGTCGCCGCCGAACGGGCACTTTGAGCATGCTTTCATGTCAAGGCAGCAGCCGCCGCCGCAGAATCAGCAGCAGCAGTTCAATAGAATGGGTGGAGGTGTGGCTGGATATGCAGAGGATATGGAATCTGCTAATGCATCTGGTGCAAGGAAGGTTCTTACTCTTTTTCCAACTGGAGATGATTGA 822 0.59 MREEDSNWFARWEDELPPPEELMPLSQTLITPDLAIAFDIPSPHTPTAAATATPTTPNHHLHHHQQPQQPQPPSNPSPSHQQQPSSGGDFADSGDLGSGAAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKPNSEHFLPFVSVPAMHHQQHHHQMAAAAAGAAAMQHVQLQQQFHRQASGHFGSPPNGHFEHAFMSRQQPPPQNQQQQFNRMGGGVAGYAEDMESANASGARKVLTLFPTGDD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03228 273 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 161 IPR044841 GO:0003700|GO:0006355
Aip10g03228 273 Pfam Myb-like DNA-binding domain 115 161 IPR001005 -
Aip10g03228 273 Gene3D - 108 165 - -
Aip10g03228 273 MobiDBLite consensus disorder prediction 46 68 - -
Aip10g03228 273 SUPERFAMILY Homeodomain-like 108 161 IPR009057 -
Aip10g03228 273 MobiDBLite consensus disorder prediction 1 18 - -
Aip10g03228 273 MobiDBLite consensus disorder prediction 1 24 - -
Aip10g03228 273 MobiDBLite consensus disorder prediction 36 110 - -
Aip10g03228 273 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 112 161 IPR006447 GO:0003677
Aip10g03228 273 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 164 271 - -
Aip10g03228 273 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 161 - -
Aip10g03228 273 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 164 271 IPR044841 GO:0003700|GO:0006355
Aip10g03228 273 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03228 Aip-Chr10 130322539 130325365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03228 1 273 G2-like Transcription Factor Family AT3G10760 46.686 2.18e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip10g03228 Myb_DNA-binding 3.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03228 - - aip:107623693 343.969