Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03221 ATGTCAATTGATTCCCAAATCTGGACACAAGGGCCGACCGGAGAAGTCCCGGCTGTTGACTCTCGCGTAGATGCATGCAAGAAAAGGTTAGCAAGCTCGAACGAAGAGGCGCATGATTGTGACAGCACTCTGATGAATGGATCTCCTTTACACATACCGGATGGTTCGTTCTCATTGGACGAGAACTTCGAATATTGTGTGAAAGTGATTCGTTGGCTAGAATGCCAGGGTCATATTAAACAGGAGTTTCGGTTGAAGTTGCTGACATGGTTCAGTTTGAGGTCGACGGAGCAAGAACGTAGGGTGGGTGTGGATTTGCTTCCTTCAAGGCTCTTACCATTTTACAGTGACAAGATCACCTTGTACAGAGGCAGTAACACATTTTTCCTTGGAGGGATGATCCTTGGAAGTGAAGATTTAAGGATGTTAGGTCTTAGGAGGCATTTTGCTATTTGCTCAATTTATTGCAATTATTTTTAA 480 0.4417 MSIDSQIWTQGPTGEVPAVDSRVDACKKRLASSNEEAHDCDSTLMNGSPLHIPDGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVGVDLLPSRLLPFYSDKITLYRGSNTFFLGGMILGSEDLRMLGLRRHFAICSIYCNYF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03221 159 PANTHER VIN3-LIKE PROTEIN 2-RELATED 3 102 IPR044514 GO:0010048|GO:0040029
Aip10g03221 159 PANTHER VIN3-LIKE PROTEIN 1 3 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03221 Aip-Chr10 130266611 130267330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03221 27 126 PHD Gene Family AT3G24440 36.937 2.52e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03221 - - lja:Lj2g3v0766400.1 183.341