Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03215 ATGGCGACGTACTTTCATGGCAATTCAGAAATCCAAGCACCTTCTTCTGCTGATGGACTTCAAACACTTGTTCTCATGAACCCTCCTCCTCCTCCTCCTCCTGCTCCTGCTGCCTACATCCACTACCCTGACGCGCCACCACCATCTCACGCTCCCGCCAACCTTCTCTTTCTCAACTCTTCCGCCACCGGAAACAACTCCTTCTCCCCTCACGCGCCTCCCCCTCATACTCAACAGTTTGTTGGAATCCCACTCTCCTCGCAGGACATCAACCACCACCACGACGTCTCCGCCCTGCATGGCTTCCTCCACCGCATGCAGTACAACCCCTGGACAACCATGGACCCCACCTCGGCGGCGCGTGAGACCCCACGCGCTCAGCAGGGTCTGTCCCTGAGTCTGTCCTCGCAGCAAGCCGGGTTAGGTTCTTTCAGGGACGTGGCGCCGCAGGCTTTGTCCGGCGACGAGATTTGCGGTGGTCGGTCAACGTCTTCGGCTTCTGCAGTGACGAACGGTGGGTCGAGCATTCAGAGCGTGATTTTGAGCTCAAAGTATCTGAAGGCAGCGCATGAGCTTCTGGAAGAGGTTGTGAATGTTAACAACGCTGAGTTGGCGACGAAGAAGATGATGAAGACAGTTGGCGAGTCATCCACTGCAGCGAGCGGAGACGGTTCCATTGGTGGCGAGGGTAGCGGCAAGCGTAGCTCAGAGCTTTCCTCCGCGGAGAGACAAGAAATTTCAATGAAGAAAGCAAAGCTACTGAGCATGCTTGATGAGGTAGAGCAAAGGTACAGACAGTACCAGCAGCAGATGGAGGTGGTGGTGTCATCGTTCGAGCAAGCGGCGGGAATAGGGTCGGGTCGGACATACACGGCGCTTGCATTGCAAACAATTTCGAAGCAGTTTAGGTGCTTGAAGGATGCCATAACAAGGCAGATCAAAGGTGCAAACAAGAGCTTAGGAGAGGAAGAAGGGTCACGCCTTAAATATGTTGACCATCACTTGCGCCAACAGAGAGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGTTCTGTTTCTCTTCTTCGTGCTTGGCTCTTTGAACACTTCCTCCACCCCTATCCCAAGGATTCTGACAAGCACATGCTTGCTAAACAAACTGGCCTTACCAGGAGCCAGGTTTCAAACTGGTTTATAAATGCCCGAGTTCGACTTTGGAAGCCAATGGTCGAAGAAATGTATGCTGAGGAGATGAAGGATGCTACTACTTCTGACGACAAATCAAACAACACCAACAACCAAGACCCTTCAACAAAAATTGCAGACAAACTTCCAACATCTGAAACAGAATCTGATAAACAAGACCACAACGCTCCCATGGTGTCACCAGTTGAAGGGAACATGAGAAACCAACCAGGGTTCAGCTTCATCATGGGATCATCAGAACTAGAAGGAATCACACAACACCAGCAGGGAAATAGTCCCAAGAAACCAAGAATCAACAACAATGAAGCTTTGCATAGTTCCCAAAGTAACATTCCTTCCATGAACATGATGGATGTGAAGCCCAATGAGCAGGGGAGACAAGGTTATTCTTTCATGGGGAACCAAACTAACTTCATTAGCGGTTTTGGACAGTACCCTTCCATTGGTGACATGGATAGGTTTGATCCAGAACAATTCACAACACCACCACCAAGGTTTTCAGGTAATGGAGTTTCCCTCACTCTTGGTCTTGATTCATTGCCCGGAACGCACCACCAATCGTTTCTACCAAACCAGAACATTCAACTCGGAAGAAGCATTGATATCGCGGAACCAAACGATTTCGTTGGCGCCATGAACACTTCTTCATCTCCTCATAACTCTGCTGCTGCTGCATTTGAGAGTATTGGCATGCAGAATCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTGGCCTGA 1962 0.5025 MATYFHGNSEIQAPSSADGLQTLVLMNPPPPPPPAPAAYIHYPDAPPPSHAPANLLFLNSSATGNNSFSPHAPPPHTQQFVGIPLSSQDINHHHDVSALHGFLHRMQYNPWTTMDPTSAARETPRAQQGLSLSLSSQQAGLGSFRDVAPQALSGDEICGGRSTSSASAVTNGGSSIQSVILSSKYLKAAHELLEEVVNVNNAELATKKMMKTVGESSTAASGDGSIGGEGSGKRSSELSSAERQEISMKKAKLLSMLDEVEQRYRQYQQQMEVVVSSFEQAAGIGSGRTYTALALQTISKQFRCLKDAITRQIKGANKSLGEEEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSLLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYAEEMKDATTSDDKSNNTNNQDPSTKIADKLPTSETESDKQDHNAPMVSPVEGNMRNQPGFSFIMGSSELEGITQHQQGNSPKKPRINNNEALHSSQSNIPSMNMMDVKPNEQGRQGYSFMGNQTNFISGFGQYPSIGDMDRFDPEQFTTPPPRFSGNGVSLTLGLDSLPGTHHQSFLPNQNIQLGRSIDIAEPNDFVGAMNTSSSPHNSAAAAFESIGMQNPKRFAAQLLPDFVA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03215 653 MobiDBLite consensus disorder prediction 491 520 - -
Aip10g03215 653 Pfam Homeobox KN domain 369 408 IPR008422 GO:0003677|GO:0006355
Aip10g03215 653 MobiDBLite consensus disorder prediction 214 242 - -
Aip10g03215 653 ProSiteProfiles 'Homeobox' domain profile. 349 412 IPR001356 GO:0003677
Aip10g03215 653 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 1 8 595 - -
Aip10g03215 653 SMART prehox3 174 311 IPR006563 -
Aip10g03215 653 SMART HOX_1 352 416 IPR001356 GO:0003677
Aip10g03215 653 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 595 - -
Aip10g03215 653 SUPERFAMILY Homeodomain-like 353 419 IPR009057 -
Aip10g03215 653 MobiDBLite consensus disorder prediction 429 448 - -
Aip10g03215 653 Gene3D - 348 427 - -
Aip10g03215 653 MobiDBLite consensus disorder prediction 422 472 - -
Aip10g03215 653 Pfam Associated with HOX 179 310 IPR006563 -
Aip10g03215 653 CDD homeodomain 352 413 IPR001356 GO:0003677
Aip10g03215 653 Coils Coil 243 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03215 Aip-Chr10 130179489 130183197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03215 1 653 Homeobox Transcription Factor Family AT2G35940 44.947 4.55e-160 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aip10g03215 POX 2.7e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03215 - - gmx:100810901 797.734