Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03212 ATGTCCACCGCCTTCTCTCTCTTCCTCTCCCTCTTCCTCCTCGCTGTCCGCCATATCCTCGCCGAAACCGACCCCAACGACGTTAGCATCCTCCACCAGTTCCGAAAAGGACTTGACGACCCTAAGCTCCTTCCATGGCCCGAAGATGGCGGCGACCCATGCGGCGCTCCTCGCTGGGACTACATCTTCTGCGACGGAAACAGAGTTGCTCAGATTCAAGCCAAGAATCTCAACCTCTCTGGTCCCTTGCCTACCACCTTCAACCAACTCACCGCACTCACCAACGTTGGCCTCCAGAATAACCGTCTCAACGGTCCTTTACCCTCTTTCAAGGGTTTGAAGGACCTCAAGTACTTGTTCTTGGACTACAACAACTTCGATTCTCTACCATCAGATTGCTTCGACGGTCTCGATAGCTTGGAGGTTCTTGCGTTGGATCACAACAACCTCAATGCCACTAATGGTGGCTGGAGTCTCCCGCCGAGTCTTCAGGGTTCGACTCAGTTGACCAATCTCTCTTGTATGAGTTGCAATTTGGTGGGTTCCTTGCCGGATTTTCTGGGGAAGATGAACTCTCTCTCGTTCCTGAAACTTTCCGACAACAATTTGACCGGAGAGTTGCCGGCGACACTAAACGGCACCGTATTGCAGGTTCTGTGGCTGAACAACCAGCAGGGTGAGGGGCTTACTGGGACAATTGATGTGGTTTCCACTATGGTTTCACTGACAAGTTTGTGGCTTCATGGAAACAAGTTCAGTGGGTCGATTCCGGAGAACATTGGAGACTTGGATTCGTTGAAGGATCTTAATCTCAACGGAAACCAGCTAGTTGGGCTTGTACCTGATGCATTAGGTAACATGAAATTGGACACTCTTGATTTGAACAATAACCATTTGATGGGTCCTATCCCTGATTTCAAAGCTGTTAATGTTACTTTTGATAACAATGATTTTTGTCAAGACAAGCCTGGGATTCCATGCGCCTTTGAGGTCATGGCACTCTTGCAATTTCTTGGTGGGTTGAATTACCCTTCTAATCTGGTGGATTCTTGGACTGGTAATGACCCTTGTTCAGGTCCATGGTTGGGAATCAAGTGTGATACTAATGGCAAGGTTTCTATGATTAATTTGCCAAATTTTAAGCTTAATGGGACGTTGAGTCCTTCTGTTGCAAACTTGGGTTCTCTTGCTGAAATTAGGTTGGGTGGTAACCATATTGGTGGTGTGGTACCTAGTAATTGGACTAACTTGTCGTCTCTTTCGTTGTTGGATCTGAGTGACGATAACATATCCGGTCCAATGCCCAAGTTTCGCCCCGGAGTGAAACTTGTGACTGTTGGGAATCCTCTGTTGGATCCACACTCCCAAGCTCCTTCATCTGGGAACAATAATCCGTCAACTGGATCTGGGAATGATGAGCCTTCAACGGGGTCTACACCTGCACACTCGAATAACAATCCAAGTAGTTCTAATGAAGCAAAGAAATCCAAAGGCAAAGCATTGGTTACTATTGTTGCTCCCATTGCGGGTGTGGCGGCTGCAGCTTTTCTGCTCATTCCAATTTATGTGTATTGTTTCAGGAGAAGAAGGAAGGATGCTTTATTGGCTCCTAGTTCACTGGTGATTCACCCAAGAGATCCATCTGATTCGGATCGTATTGTAAAGATTGCTGTTGCTAATAATACCAATGGAAGCATCTCAACTCTAACAGGGAGTGGGTCTGGGAGTCGAAACAGCAGCGGGATTGGGGATTCTCATGTGATTGAAGCTGGCAATCTTGTGATATCTGTTCAGGTTCTACGAAATGTGACCAAGAATTTTGCCTCCGAGAACGAGCTTGGTCGTGGTGGGTTTGGTGTTGTTTATAAGGGAGAATTGGATGATGGCACAAAAATTGCAGTGAAGCGAATGGAAGCTGGTGTCATTAGTAGCAAAGCGTTAGATGAATTCCAGGCTGAAATTGCAGTTCTATCAAAAGTTAGACACCGGCATCTAGTGTCTCTTTTGGGTTATTCCATTGAAGGGAATGAGAGAATTCTAGTTTATGAGTATATGCCTCAAGGTGCACTAAGTAAGCATCTTTTCCATTGGAAGAGTTTTGGAATGGAGCCACTCTCTTGGAAGAGGAGGCTCAATATTGCCCTGGATGTTGCTAGAGGACTGGAGTACCTTCATTCTATGGCCCACCAAAGCTTCATTCACAGAGATCTTAAGTCGTCGAATATTTTGCTTGCTGATGATTTCAGAGCAAAAATATCAGATTTTGGATTGGTAAAACTTGCTCCTGAAGGTGAAAAGTCTGTAGTGACCCGGCTTGCAGGGACTTTCGGATACTTGGCACCAGAATATGCAGTGACGGGAAAAATCACTACCAAAGCAGATGTTTTCAGCTTTGGGGTTGTGCTAATGGAGCTGTTGACGGGATTGATGGCGCTTGATGAGGGTAGATCTGAGGAAAGCCAATACTTGGCAGCATGGTTCTGGCATATAAAATCAGACAAGAAGAAACTAAGGGCTGCCATTGATCAATCCCTTGACATAAAAGAAGAAACGTTCGAGACCATCTGCGTCATTGCCGAGTTAGCTGGACACTGCACTGCCAGAGAACCAAGCCAACGGCCTGATATGGGTCATGCTGTGAATGTTCTGGCGCCACTGGTTGAAAAATGGAAACCATTTGATGATGACACAGAGGAATATTCCGGCATTGATTATAGCCTTCCTCTTAACCAGATGGTGAAGGACTGGCAGGAAGCAGAAGGAAAGGACTTGAGTTATATGGACTTGGAAGATAGCAAGAGTAGTATCCCAGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCAGCTGATGGTAGATGA 2862 0.4609 MSTAFSLFLSLFLLAVRHILAETDPNDVSILHQFRKGLDDPKLLPWPEDGGDPCGAPRWDYIFCDGNRVAQIQAKNLNLSGPLPTTFNQLTALTNVGLQNNRLNGPLPSFKGLKDLKYLFLDYNNFDSLPSDCFDGLDSLEVLALDHNNLNATNGGWSLPPSLQGSTQLTNLSCMSCNLVGSLPDFLGKMNSLSFLKLSDNNLTGELPATLNGTVLQVLWLNNQQGEGLTGTIDVVSTMVSLTSLWLHGNKFSGSIPENIGDLDSLKDLNLNGNQLVGLVPDALGNMKLDTLDLNNNHLMGPIPDFKAVNVTFDNNDFCQDKPGIPCAFEVMALLQFLGGLNYPSNLVDSWTGNDPCSGPWLGIKCDTNGKVSMINLPNFKLNGTLSPSVANLGSLAEIRLGGNHIGGVVPSNWTNLSSLSLLDLSDDNISGPMPKFRPGVKLVTVGNPLLDPHSQAPSSGNNNPSTGSGNDEPSTGSTPAHSNNNPSSSNEAKKSKGKALVTIVAPIAGVAAAAFLLIPIYVYCFRRRRKDALLAPSSLVIHPRDPSDSDRIVKIAVANNTNGSISTLTGSGSGSRNSSGIGDSHVIEAGNLVISVQVLRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISSKALDEFQAEIAVLSKVRHRHLVSLLGYSIEGNERILVYEYMPQGALSKHLFHWKSFGMEPLSWKRRLNIALDVARGLEYLHSMAHQSFIHRDLKSSNILLADDFRAKISDFGLVKLAPEGEKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEGRSEESQYLAAWFWHIKSDKKKLRAAIDQSLDIKEETFETICVIAELAGHCTAREPSQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKDWQEAEGKDLSYMDLEDSKSSIPARPTGFADSFTSADGR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03212 953 PANTHER OSJNBA0070M12.3 PROTEIN 6 953 - -
Aip10g03212 953 MobiDBLite consensus disorder prediction 448 495 - -
Aip10g03212 953 Gene3D Ribonuclease Inhibitor 329 451 IPR032675 -
Aip10g03212 953 CDD STKc_IRAK 613 886 - -
Aip10g03212 953 SMART LRR_typ_2 239 262 IPR003591 -
Aip10g03212 953 SMART LRR_typ_2 190 213 IPR003591 -
Aip10g03212 953 SMART LRR_typ_2 263 286 IPR003591 -
Aip10g03212 953 SMART LRR_typ_2 113 136 IPR003591 -
Aip10g03212 953 SMART LRR_typ_2 137 165 IPR003591 -
Aip10g03212 953 MobiDBLite consensus disorder prediction 931 953 - -
Aip10g03212 953 Gene3D Transferase(Phosphotransferase) domain 1 685 903 - -
Aip10g03212 953 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Aip10g03212 953 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Aip10g03212 953 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Aip10g03212 953 Gene3D Ribonuclease Inhibitor 24 325 IPR032675 -
Aip10g03212 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Aip10g03212 953 SUPERFAMILY L domain-like 330 436 - -
Aip10g03212 953 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Aip10g03212 953 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Aip10g03212 953 SUPERFAMILY L domain-like 23 308 - -
Aip10g03212 953 ProSiteProfiles Protein kinase domain profile. 607 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03212 953 Pfam Protein kinase domain 609 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03212 953 SUPERFAMILY Protein kinase-like (PK-like) 585 890 IPR011009 -
Aip10g03212 953 SMART serkin_6 607 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03212 953 Gene3D Phosphorylase Kinase; domain 1 573 684 - -
Aip10g03212 953 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 6 953 - -
Aip10g03212 953 MobiDBLite consensus disorder prediction 452 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03212 Aip-Chr10 130061962 130065834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03212 79 920 Receptor kinase-like Gene Family AT1G55610 29.989 7.91e-83 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aip10g03212 Pkinase 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03212 - - gmx:100305366 1441.4