Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03205 ATGGGTCAGGGAACAGGGAGCTTTGGTAAGAAGAAGAACAAGACTCACACCCTCTGTGTGAGGTGCGGTCGCTGCGGCTTTCACCTCCAGAAGAGTCGCTGCTCCGCCTGTGCTTTCCCCGCTGCACGCAAGAGGAAATTCCATCCGCAGAAAGACCACCGGCACCGGCAGGATGAGGTACCTCTGCCAGGTGCCTTGCCGATTCAAGAGCGGCTTCAGATAAGGTACTGA 231 0.5714 MGQGTGSFGKKKNKTHTLCVRCGRCGFHLQKSRCSACAFPAARKRKFHPQKDHRHRQDEVPLPGALPIQERLQIRY 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03205 76 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Aip10g03205 76 PANTHER BNAA02G30880D PROTEIN 1 46 - -
Aip10g03205 76 Pfam Ribosomal protein L37e 3 48 IPR001569 GO:0003735|GO:0005840|GO:0006412
Aip10g03205 76 PANTHER 60S RIBOSOMAL PROTEIN L37 1 46 - -
Aip10g03205 76 SUPERFAMILY Zn-binding ribosomal proteins 1 48 IPR011332 GO:0006412
Aip10g03205 76 Gene3D - 1 53 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03205 Aip-Chr10 130003106 130003653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03205 1 48 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 77.083 1.09e-23 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03205 K02922 - pop:7483529 94.7449