Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03179 ATGCCGGCGCTCGCTGATTTTCGCTTCTTCATATTCATAATCCCCAACATGGAGAATCAAATTAGAATGCCGTCGGCCTTCTCCAACCTTGTCTGGGAGAACATGAGCAACCCCGTCGAGGTAAGCACCACAAATGGTCAGTCGTGGAGCATCTCGTGGGTTGTTGAGGAGGAGCATCCGCATCGAATCGTCTTCACCGGAGGGTGGCGAGCCTTTTACGAACACTACCATCTTCGAATCGGTGCCACGCTGCTATTATCGTATCACCAACCAAAGTTTTTCAATGTGGCCATCTACGGCACAAGTTTCTGCGAGATCAACTATGGAAGAAACTTGCAAAACGGAAGTCTTCCAGCAATACCCACACATGGCAACTATACAGTCCAGTTCTTCGTGATAATCCCGGTGAACGACCCTGATACACTGCGGTCATACAATAGAAATCAACTACTTGGCCCATGTCGGGCCGGGGACGGACTGCACTTGTATAAGCTATCTGATGGCCCCCAGGTCAATGCACATAGCCGATGGGTTCAGATCGACCAATCCGTTCTTAGTCAAGCCAATCGTACACTGCCTGGCATCCCGTTTTCTCGTAAAATATGTCCTCGCTTCCAGCCAAATGTCCCCCCTCTGTCGAGAGTCTACGAGGATAGCCCAATTTCGATTACCAACGAGAGGGGCGTGTGGACCGTTCAGTATACGCACTATGTCGGAAGGACGAACGGATGTTTTGGAGTAGGCTGGTCTGCCTTAGCAACTGCATGCCAACTAAGACACGGCCATGTGTGTGTCGTCGAGCGGCTGGCGCCGCAAGACTACCGGCTGCATATATATTGA 840 0.5095 MPALADFRFFIFIIPNMENQIRMPSAFSNLVWENMSNPVEVSTTNGQSWSISWVVEEEHPHRIVFTGGWRAFYEHYHLRIGATLLLSYHQPKFFNVAIYGTSFCEINYGRNLQNGSLPAIPTHGNYTVQFFVIIPVNDPDTLRSYNRNQLLGPCRAGDGLHLYKLSDGPQVNAHSRWVQIDQSVLSQANRTLPGIPFSRKICPRFQPNVPPLSRVYEDSPISITNERGVWTVQYTHYVGRTNGCFGVGWSALATACQLRHGHVCVVERLAPQDYRLHIY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03179 279 SMART B3_2 9 102 IPR003340 GO:0003677
Aip10g03179 279 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 109 - -
Aip10g03179 279 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Aip10g03179 279 PANTHER B3 DOMAIN-CONTAINING 8 109 - -
Aip10g03179 279 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
Aip10g03179 279 Gene3D - 179 279 IPR015300 -
Aip10g03179 279 Gene3D - 4 104 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03179 Aip-Chr10 129614091 129615503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03179 7 108 B3 DNA Binding Superfamily AT3G18990 29.412 4.82e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03179 - - adu:107492861 372.089