Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03177 ATGAAAATACCACTAGGGGCGTGCGCGTCGTCAGATGGGGATGTGGTTGAATTGGAAGAAAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGACGATGAGTTTTACGCTGTTGATTCCGGCGAGTCGCTAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTCCTTGATGCCTAACCGGAAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACAATGAATCAGGACGTTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACAACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCAAATTCACCGATTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCTGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGAAGGGTGGCCTAGATGTGGAATCGTGCTTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAATTGTTGACGGTGAGGGCGTGTTGCAACATTTTTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACTTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCATAACCAAATGGCTGTCTTTGCCGCTGCACTAGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGAAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTctgcgatcgagcaagtttttccagaggctcaccatcgactctgtgcttggcatctACTCCGAAACGCCACGAGCAACATCGGAAAGCCTAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTTGCCGATAAAAGATGGATATAG 1179 0.4767 MKIPLGACASSDGDVVELEESLDGAGGMSDNYADDEFYAVDSGESLAICKAPWLRRETFQKEKRGEVRIRQEFVCHRQGYRSPKFSLMPNRKKRPRAETRCGCPARMLLRMDNESGRWHVAYFSDAHNHNVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSQIHRFMASLAGGYHNVLYTTRDMHNVNAKQRRKGGLDVESCLRYLRECKANDPALYYKEIVDGEGVLQHFFWCDGTSQIDYQVFGDVVAFDATYKKNFYLSPLVVFSGVNHHNQMAVFAAALVADEKEETYVWLLQQLKTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFQRKWFEMVEKFGVADKRWI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03177 392 PANTHER OS02G0262500 PROTEIN 75 391 - -
Aip10g03177 392 Pfam MULE transposase domain 252 346 IPR018289 -
Aip10g03177 392 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 391 IPR031052 GO:0006355
Aip10g03177 392 Pfam FAR1 DNA-binding domain 55 132 IPR004330 -
Aip10g03177 392 ProSiteProfiles WRKY domain profile. 44 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03177 Aip-Chr10 129610500 129611764 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g03177 MULE 1.8e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03177 - - ahf:112779874 689.878