Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03175 ATGCATCCTCATGTAGATTACTTGCAATGCCACGAGTCCCAGTACTTATCAAGGGGTGGTTTGTTGTTATTGGAGCATGGTCTTCTCTCAAAACAGAAAAGAAACGAAGAAAGAAAGAAAGGAGATATGGAGAATGGAAACACGTCATCGTCAGGAATAGCAAGAACGAAATCGGATCAGCTATTGATGATGGAATCGGCGACGGCGGCGAATAGTATTAAGTCATCGCCGGAGAGTGGTGGAGGAGGAAACCTGTCTCGGAAATCGAGCAGGAGGATGACGCACATAAGGAAGTCTCGGAGCGCGCAGATGAAGATAGAGGTGGATGAGGTGAGCAGCGGTGCGGCACTTAGCAGAGCGTCAAGTGCGAGCTTGGGGCTGTCTTTCTCCTTCACTGGCTTCACTCTTCCTCCTGATGATGAAATCTCCGACTACAAGCCCTTCAGTGATGATGATGATATCCCGGAAGATATTGAAGCTGGAACTCATAAGCCAAAGTTTCAAATGGATCTTACTCTACCAATATATCTAAAGTTCAGTGATGTGACATATAAGGTAGTGATGAAAGGAATGACAACAAGTGAGGAGAAGGATATACTGAAGGGTATTACTGGTTGTGTGAGTCCAGGGGAAGTTTTGGCATTGATGGGACCCTCAGGAAGTGGAAAAACATCACTGCTGAGTCTTCTTGGAGGAAGAATAACTCATCACCCCACTGTTGGTGGATCTATCACCTACAATGACCAGCCTTATTCTAAGTTCCTCAAGAGTAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCATCTAACCGTAAAAGAAACATTGACATATGCAGCCAGACTAAGATTGCCAAATACATTAACTCAGGAGCAAAAGGAACAACGTGCTTTAGATGTCATCTATGAGCTTGGTTTGGAAAGGTGCCAAGACACTATGATAGGAGGATCCTTTGTTCGAGGAGTATCTGGGGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTCTTCTTGATGAACCAACTTCTGGCCTCGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAACACATAGCAGAGGCTGGTAAAACGGTAGTGACAACAATCCATCAACCATCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGATTTACTTTGGAAAAGCATCTGAAGCTATGTCTTACTTCCAGTACATAGGGTGTTCACCTCTCATCACCATGAACCCAGCAGAGTTTCTACTTGACCTTGCAAATGGTAACATAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAAGTTCAAATGGGGAATTTGTCAGAAGCTGAAACTCGCAATGGGAAACCATCACCTGCACTTGTGCAAGAGTATCTAGTGGAGGCGTATGAGACTAGAGTTGCTGAAATAGAAAAGAAAAAGCTACTGGTTCCTATCCCCCTTGATGAAGAACTCAAGTCTAAGGTTCTTTGTTCTAAAAGACAATGGGGAGCAAGTTGGTGTGAGCAATTTTCCATCTTGTTCTTGAGAGGATTCAAAGAAAGGAGGCATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACAGCAGTCATCTTAGGATTGCTATGGTGGCAATCAGATGCTAAAAACCCAAAAGGCATGCAAGACCAGGCAGGACTACTTTTCTTCATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTCCCACAAGAGAGAGCAATGTTAAATAAGGAAAGAGCAACAGATATGTATAGACTAAGTGCATATTTTGTGGCAAGAACTACAAGTGACCTTCCATTAGACCTTATCTTACCAGTGCTTTTCCTCTTAGTTGTTTACTTCATGGCTGGATTGAGACTCAGTGCAGGACCATTCTTGCTTAGCATCCTTACAGTTTTTCTCTGCATAGTTGCAGCTCAGGGACTTGGACTTGCTATTGGGGCAACACTAATGGACTTGAAAAGGGCAACAACATTGGCTTCAGTTACTGTAATGACTTTCATGCTTGCTGGAGGCTTTTTTGTGAAGAGGGTGCCGATATTTATATCGTGGATCCGGTACATATCTTTCAACTACCACACGTACAAACTTCTGCTGAAGGTGCAATATGATGAAGAAGTGACACCAATGATAAATGGAATCAGAATTGATAGTGGCTCAACAGAGGTGGTTGCTCTGATAGCAATGGTTTTTGGTTACCGTCTATTGGCATATTTTTCCTTGCGTTGGATGAATGTTTCATAA 2322 0.4276 MHPHVDYLQCHESQYLSRGGLLLLEHGLLSKQKRNEERKKGDMENGNTSSSGIARTKSDQLLMMESATAANSIKSSPESGGGGNLSRKSSRRMTHIRKSRSAQMKIEVDEVSSGAALSRASSASLGLSFSFTGFTLPPDDEISDYKPFSDDDDIPEDIEAGTHKPKFQMDLTLPIYLKFSDVTYKVVMKGMTTSEEKDILKGITGCVSPGEVLALMGPSGSGKTSLLSLLGGRITHHPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTQEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQHIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLIYFGKASEAMSYFQYIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLSEAETRNGKPSPALVQEYLVEAYETRVAEIEKKKLLVPIPLDEELKSKVLCSKRQWGASWCEQFSILFLRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKGMQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYISFNYHTYKLLLKVQYDEEVTPMINGIRIDSGSTEVVALIAMVFGYRLLAYFSLRWMNVS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03175 773 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 82 770 - -
Aip10g03175 773 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 82 770 - -
Aip10g03175 773 SMART AAA_5 209 401 IPR003593 -
Aip10g03175 773 Pfam ABC-2 type transporter 520 729 IPR013525 GO:0016020|GO:0140359
Aip10g03175 773 MobiDBLite consensus disorder prediction 33 105 - -
Aip10g03175 773 Pfam ABC transporter 200 352 IPR003439 GO:0005524
Aip10g03175 773 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 177 424 IPR003439 GO:0005524
Aip10g03175 773 Pfam ABC-2 type transporter 381 442 IPR043926 GO:0140359
Aip10g03175 773 ProSitePatterns ABC transporters family signature. 324 338 IPR017871 GO:0005524
Aip10g03175 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 418 IPR027417 -
Aip10g03175 773 MobiDBLite consensus disorder prediction 45 89 - -
Aip10g03175 773 Gene3D - 176 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03175 Aip-Chr10 129589915 129598186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03175 163 438 Calmodulin-binding Proteins AT2G36910 27.273 1.19e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03175 K05681 - gmx:100802030 1135.55