Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03172 ATGGTTGGAGGCCCAACACCTAACCATGTGAAGAAAAGATCAAGAAAGAGCAATGCAATTGGTGCTAATGAGAATGAACCATTGTTACCAAAATCTCAAGAAAATTATAACGATGATGATGATTTTAAAGGATCCTCATTCGCCAGTGCGACCTTCAATTTATCAACCACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCAACCCTCAAAGTGTTGGGGATGGTCCCTGGCCTTATTACTATCATTTTCATGGCTTTCTTGACGGACAAGTCAATCGAATTCATGATCCGATTTTCACGCGCCGGCGGCCTTACTTCTTATGGTGATCTCATGGGGGATGCCTTTGGGAGATATGGAAAAGCTGTGCTTCAAATTAGTGTCATAATCAACAATGTTGGCATACTTATTGTTTACATGattattattgGTGATGTGCTATCTGGAACATCTTCAAGTGAAGATCACCATTATGGAATACTTGAAGGATGGTTTGGTGTACATTGGTGGACAGGCCGTACAGTTGTTCTTATTTTTACTACACTTGCTATATTTCTTCCTTTGGTTAGCTTTAAGAGAATTGATTCGTTGAGTTTTACATCGGCACTATCAATTGCACTAGCAGTTGTGTTTCTTGTAGTTGCTGTGGGAATAGCAATTTTCAAGATCATAAGTGGAGGCATTGGAATGCCAAGACTCTTTCCAGTTATTAATGATTTGACAGATTTCTTCCAACTCTTCACTGTAACTCCTATTCTTGTCACTGCCTATATATGTCACTACAACGTTCACAACATAGACAATGAAATGGAGGACTCCTCTCAAATGCATGGAGTTGTAAGGACATCCCTTGCAATGTGTTGTTCAGTGTACCTATTAACAAGCTTCTTTGGTTTCCTCCTATTTGGAGAATCAACTCTTGAAGATGTCTTAGCAAACTTTGACACTGATCTTGGAATCCCTTTCGGCCCTGCGCTTAACGACGCCATTCGATTTAGCTACGCCGCGCACATCATGCTTGTTTTTCCAGTTGTCTTCTATCCCCTGCGAATCAACTTAGATGGCCTCATCTTTTCGTCTTCTTCAAGGCCTTTGCTTCAAGATAACTTGAGATTCACGTCACTAACCTTATCTCTTATTCTTCTAATATTTCTTGGTGCAACCTTAATACCTAGCATTTGGGACGCTTTTCAGTTCACTGGAGCAACCGCCACCGTTTTTGTAGGGTTTATTTTCCCGGCTGCCGTCACTCTTAGGGATCGATACGACATTGCAACCAAACAAGACAAGATTCTTTCGGTTATGATGATCATATTGGCAGTATTCTCAAATGTTGTGGCTATATACAGTGATGCCATTGCCTTGGTGAATAAGGATAAAAGCAAAACTTCACGTGAATGA 1401 0.4069 MVGGPTPNHVKKRSRKSNAIGANENEPLLPKSQENYNDDDDFKGSSFASATFNLSTTIIGAGIMALPATLKVLGMVPGLITIIFMAFLTDKSIEFMIRFSRAGGLTSYGDLMGDAFGRYGKAVLQISVIINNVGILIVYMIIIGDVLSGTSSSEDHHYGILEGWFGVHWWTGRTVVLIFTTLAIFLPLVSFKRIDSLSFTSALSIALAVVFLVVAVGIAIFKIISGGIGMPRLFPVINDLTDFFQLFTVTPILVTAYICHYNVHNIDNEMEDSSQMHGVVRTSLAMCCSVYLLTSFFGFLLFGESTLEDVLANFDTDLGIPFGPALNDAIRFSYAAHIMLVFPVVFYPLRINLDGLIFSSSSRPLLQDNLRFTSLTLSLILLIFLGATLIPSIWDAFQFTGATATVFVGFIFPAAVTLRDRYDIATKQDKILSVMMIILAVFSNVVAIYSDAIALVNKDKSKTSRE 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03172 466 MobiDBLite consensus disorder prediction 1 35 - -
Aip10g03172 466 PANTHER AMINO ACID TRANSPORTER 8 459 - -
Aip10g03172 466 Pfam Transmembrane amino acid transporter protein 44 450 IPR013057 -
Aip10g03172 466 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03172 Aip-Chr10 129484910 129486929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03172 1 462 Amino Acid or Auxin Permease AAAP Family AT3G30390 61.688 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03172 K14207 - gmx:100795222 659.833