Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03162 ATGCTCAAAACACTTGAAAGGTACCAAAAATGTAGCTATGGTGCAGTAGAAGTCAACAAACCTGCCAAAGAGCTTGAGCAGAACAGTTACCGTGAGTATCTAAAACTGAAAGCAAGATTTGAATCTCTTCAAAGGACTCAGAGGAACCTTCTTGGTGAAGACTTAGGTCCATTAGGCACCAAAGAGCTTGAGCAGCTTGAGCGTCAACTTGATACATCTCTCAGGCAAGTCAGGTCTACTAAGACTCAATTCATGCTGGACCAGTTAGCTGATCTGCAAAACAAGGAACAGATTCTGGTGGAAGCAAACAGATCTTTAACCATGAAGCTGGAGGAAATCAATTCAAGAAACCAGTATCGGCAACCGTGGGAGGCCGGCGAACAAAGCATGCAATATGGTACACAGAATGCTCACTCTCAAGGCTTTTTCCAGCCTCTGGAATGCAATCCCACATTGCAGATAGGTCCTGATTACAGGTACAACCCTGTAGCTTCAGATCAGATAACGGCAACAACTCAGGCTCAACAAGTGAATGGATTTGTTCCTGGATGGATGCTTTGA 561 0.4439 MLKTLERYQKCSYGAVEVNKPAKELEQNSYREYLKLKARFESLQRTQRNLLGEDLGPLGTKELEQLERQLDTSLRQVRSTKTQFMLDQLADLQNKEQILVEANRSLTMKLEEINSRNQYRQPWEAGEQSMQYGTQNAHSQGFFQPLECNPTLQIGPDYRYNPVASDQITATTQAQQVNGFVPGWML 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03162 186 Coils Coil 63 83 - -
Aip10g03162 186 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip10g03162 186 PANTHER MADS BOX PROTEIN 1 171 - -
Aip10g03162 186 PANTHER MADS-BOX TRANSCRIPTION FACTOR 1 171 - -
Aip10g03162 186 Pfam K-box region 26 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03162 Aip-Chr10 129299704 129304066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03162 1 186 MADS-box Gene Family AT5G15800 67.164 1.18e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03162 K09264 - gmx:100785322 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03162 10 129299704 129304066 Aip04g03472 04 129166928 129172244 PCT