Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03158 ATGGCTTTTACCTTCATTGCAATTGTTGGTGGTGTTTTGTTCTTGTTCTGTTTTTTCTCTGCTCTTTTGAGATGGAATGAAGTAAGGTACATGAAGAAGAATAAAGGTTTGCCACCAGGTACAATGGGGTGGCCACTTTTTGGAGAAACAACTGAGTTTCTTAAACAAGGTCCTAACTTCATGAAAAACCAAAGAGCAAGGTATGGCAGTTTTTTCAAATCACACATATTGGGGTGTCCTACAATTGTATCAATGGATGCAGAGCTTAATAGATACATTCTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCTAAATCCATGTTAGACATCTTGGGAAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACTTGAGAGGTGCCTTGCTTTCTATCATTAGCCCCACCATGATCAGAGATCAGCTTTTGCCAAAAATTGATCACTTCATGAGATCCCACCTTAGCAATTGGGACAATCAAGTCATCAACATCCAACACAAAACCAAAGAGATGGCCTTCCTTTCATCACTGAGGCAGATTGCAGGCAAAGAATCAAGCAGAATATCAGATTCAATCATGCCAGAATTCTTTAATCTAGTATTAGGAACCCTTTCTCTTCCTATTCACCTTCCGGGGACGAATTATAGTCGCGGATTTCAGGCAAGGAAAGCTATTGTGAGTATTGTGAGTGAGGTAATAGAGGAAAGGAGAAAATCCCAAGAAATACACAAAGACATGCTTGGAGGATTGATGGGAAATGATGATGAAAGTAGACACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATTACAGTTATGTATTCTGGTTATGAAACTGTTTCAGCCACGTCAATGATGGCAGTGAAGTATCTTCAGGACCATCCCAAAGCACTTGAAGAACTCAGAGAAGAGCATTTGGCCATTAGAGAAAGGAAAAAACCAGACGAACCAATTGATTTCAACGATCTCAAGTCAATGAGGTTTACTCGCGCGGTGATTTTTGAGACTGCTAGATTGGCCACAATAGTTAATGGCGTCCTAAGAAAAACCATTCAAGATGTGGAGTTAAatgGTTATTTGATTCCCAAAGGGTGGAAGATATATGTGTTCATAAGAGAGATAAATTATGACCCTTTTCTATATCCGGAGCCACTAAAGTTCAACCCATGGAGATGGCTGCAGGATCAGAGCCTAGAGTCAAAAAACCACTTCTTGGTATTTGGACGAGGTACAAGATTGTGTCCAGGGAAAGATTTGGGGATAGCTGAAATTTCAACTTTCTTGCACTATCTTGTAACTAGATACAGGTGGGAAGCAGCAGGAGATGATAAACTAGTGAAATTTCCTCGAGTTTCAGCACCTAATGGACTGCATATAAGGGTGTCATCTTACTAA 1410 0.3993 MAFTFIAIVGGVLFLFCFFSALLRWNEVRYMKKNKGLPPGTMGWPLFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDAELNRYILMNESKGLVPGYPKSMLDILGKCNIAAVHGSTHKYLRGALLSIISPTMIRDQLLPKIDHFMRSHLSNWDNQVINIQHKTKEMAFLSSLRQIAGKESSRISDSIMPEFFNLVLGTLSLPIHLPGTNYSRGFQARKAIVSIVSEVIEERRKSQEIHKDMLGGLMGNDDESRHKLSDEEIIDLVITVMYSGYETVSATSMMAVKYLQDHPKALEELREEHLAIRERKKPDEPIDFNDLKSMRFTRAVIFETARLATIVNGVLRKTIQDVELNGYLIPKGWKIYVFIREINYDPFLYPEPLKFNPWRWLQDQSLESKNHFLVFGRGTRLCPGKDLGIAEISTFLHYLVTRYRWEAAGDDKLVKFPRVSAPNGLHIRVSSY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03158 469 SUPERFAMILY Cytochrome P450 30 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 Pfam Cytochrome P450 38 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 467 - -
Aip10g03158 469 PANTHER CYTOCHROME P450 26 9 467 - -
Aip10g03158 469 Gene3D Cytochrome P450 28 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Aip10g03158 469 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03158 469 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03158 Aip-Chr10 129150739 129185385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03158 85 469 Cytochrome P450 AT5G38970 66.062 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03158 K09590 - gmx:100805958 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03158 10 129150739 129185385 Aip04g03465 04 129076611 129079414 PCT