Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03154 ATGAGGCTTGTCATCTTAGTTCTTTGTGTAATTGTGTTGTTCTCCAATGCAGGTGCTTATGATCCTTTGGATCCAAATGGGAATGTAACAATCAAATGGGATATAGTGTCTTGGACTCCAGATGGCTATGTTGCGGACGTAACGTTGTACAACTTCCAAATGTTCCGGCACTTAATGAACCCTGGATGGACCCTGGGATGGACATGGGCAAAGAAAGAAGTGATATGGTCTATGATAGGAGCTCAAACAACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAACATACCTCACTGCTGCAAGAAAATCCCAACAGTTGTGGACTTGCTCCCTGGTGTCCCTTACAACCAGCAATTCACAAATTGTTGTAAGGGTGGAGTTGTTGCCGCATGGGGCCAAGATCCTTCACAGGCTATCTCTTCATTCCAAATAAGTGTTGGCCAAGCCGGTACCTCCAACAAGACGGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCCGGACCGGGATACACTTGTGGCCGGGCCAAGGTTGTTCCTTCCACCACTTTTCTTACTCCGGACAAGCGCCGCAAGACTCAAGCCCTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCTGCTTGTTGTGTATCTTTGTCATCCTTCTACAATGAAACTATTACCCCTTGTCCCTCTTGTGCATGTGGCTGCCAGAACAAAAGGAATTGTGTCAAGAGTGACTCTAAAATTCTGAGCATGGTTGGTGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAGTGCACTCATCATATGTGTCCAATAAGGGTGCATTGGCATGTGAAGCAAAACTATAAGGACTATTGGCGAGTCAAGATTGCCATAACAAATTTCAATTACCGGATGAACTATTCCCTCTGGACTCTTGCAATTCAGCATCCAAATCTCAACAATGTCACACAAGTTTTCAGCTTTGATTACAAGCCTATACTTCCCTATGCTTCCATAAATGACACTGGCATGTTCTTTGGCATGAAATACTTCAATGACCTATTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAAGACACATTCACATTCAAGCAAGGTTGGGCATTTCCAAGAAAAGTCTACTTTAATGGTGATGAATGCATGCTTCCACCACCAGATTCCTACCCATTCCTCCCTAATTCTTCCCCTCAAACACTAAATGCCTTCCCAGCACTCATTTTATCATTGATATTCTTCCTAGTTTTATGA 1293 0.437 MRLVILVLCVIVLFSNAGAYDPLDPNGNVTIKWDIVSWTPDGYVADVTLYNFQMFRHLMNPGWTLGWTWAKKEVIWSMIGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSQAISSFQISVGQAGTSNKTVKLPKNFTLLAPGPGYTCGRAKVVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPACCVSLSSFYNETITPCPSCACGCQNKRNCVKSDSKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPILPYASINDTGMFFGMKYFNDLLMEAGPTGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSSPQTLNAFPALILSLIFFLVL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03154 430 PANTHER COBRA-LIKE PROTEIN 5 429 - -
Aip10g03154 430 PANTHER PROTEIN COBRA 5 429 IPR006918 GO:0010215|GO:0031225
Aip10g03154 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0031225
Aip10g03154 430 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03154 Aip-Chr10 129094743 129097422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03154 19 430 COBRA Gene Family AT3G29810 67.470 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03154 - - gmx:100798678 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03154 10 129094743 129097422 Aip04g03460 04 129024948 129027526 PCT
Aip04g03461 04 129027707 129030404 Aip10g03154 10 129094743 129097422 PCT