Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03153 ATGTTGTCTTCTTCCGTTGCCAAATTCCGATTCTTCATCAAACCGCCTCCATGCATTTTGCTCTTCTTCCTTCTGTCTTTCACTTCCTTCACTTCAACAGAAGCATATGATGTGCTTGATCCAAACGGAAATATTACAATCAGATGGGATATTATAAGCTGGACACCAGATGGTTATGTTGCTGTTGTTACATTAAACAATTTCCAGCAATACCGTCACATCTCGGCGCCAGGGTGGTCGCTAGGGTGGACATGGGCAAAGAAAGAGGTAATATGGAGCATGATGGGAGGGCAGACTACCGAACAAGGCGATTGCTCGAAATTCAAGACAACCCCACCACATTGCTGTAAAAAGGACCCAACCGTTGTAGATTTACTTCCTGGAACACCATACAATCAACAAATTGCAAATTGTTGCAAAGGAGGTGTACTCAGCTCATGGGGACAGGATCCGGCAAATGCCATTGCATCATTTCAAATCAGTGTTGGTAGAGCTGGAACCTCTAACAAAACAGTCAGGGTGCCCAAGAACTTCACCTTGAAAGCACCGGGACCGGGTTATACCTGTGGGCCGGGAAAAATTGTTCAACCTACTCAATTCTTAACAGGAGATAAAAGAAGAAGGACTCAAGCTCTCATGACATGGAATGTGACATGCATGTATTCACAATTTCTAGCTCAGAAAACTCCCAGTTGCTGTGTTTCACTCTCATCTTTCTATAATGATACCATTGTACCCTGCCCGACATGTTCGTGTGGCTGCCAGGGAAACTCTTCTCAATCCGGGAACTGTGTAGATCCAGATAAACCGCATTTGGCATCGGTTGTTGCTAACCCTGCAAAGAGTTCCCCTTTCGTTCAATGTACTCGCCATATGTGTCCTGTCCGAGTTCATTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTATTACTAATTTCAATTACAAGATGAACTATACAGATTGGAACTTGGTTATTCAACACCCGAATTTCGACAATTTGACTCAGCTTTTTAGTTTTAACTACAAGTCATTGACACCCTATGGCACAATAAATGATACAGCATTGCTATGGGGAATTAAGTTCTACAATGATTTGCTAATGGAAGCCGGTCCGGAAGGTAATGTACAATCAGAGCTACTCTTCCGAAAGGATAAATCAACTTTTACTTTCGACAAAGGTTGGGCGTTTCCTCGGAGGATCTATTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCGTGGCTGCCAAATGCCAGTTCCCGGCAAGAGGTTTCCTTGCTAGCTTTAGTGCTGGCTTCCTTTGTAGCCTTGGCATTGTGTGCATATGCTTAA 1359 0.4386 MLSSSVAKFRFFIKPPPCILLFFLLSFTSFTSTEAYDVLDPNGNITIRWDIISWTPDGYVAVVTLNNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKTTPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWGQDPANAIASFQISVGRAGTSNKTVRVPKNFTLKAPGPGYTCGPGKIVQPTQFLTGDKRRRTQALMTWNVTCMYSQFLAQKTPSCCVSLSSFYNDTIVPCPTCSCGCQGNSSQSGNCVDPDKPHLASVVANPAKSSPFVQCTRHMCPVRVHWHVKLNYKEYWRVKVTITNFNYKMNYTDWNLVIQHPNFDNLTQLFSFNYKSLTPYGTINDTALLWGIKFYNDLLMEAGPEGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRQEVSLLALVLASFVALALCAYA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03153 452 PANTHER PROTEIN COBRA 11 450 IPR006918 GO:0010215|GO:0031225
Aip10g03153 452 PIRSF COBRA 9 452 IPR006918 GO:0010215|GO:0031225
Aip10g03153 452 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Aip10g03153 452 PANTHER COBRA-LIKE PROTEIN 11 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03153 Aip-Chr10 129091463 129094489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03153 1 448 COBRA Gene Family AT3G02210 73.171 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03153 - - gmx:100783820 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03153 10 129091463 129094489 Aip04g03459 04 129018278 129021633 PCT
Aip04g03460 04 129024948 129027526 Aip10g03153 10 129091463 129094489 PCT