LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip10g03141	ATGAACTTGAAGAGTTATACGTATAGCATAACCTCTGCCATATCCACTCTCCTTTATCTTTCTTTCTTGTTCCTCTCGGACTTGGCCATATCTATTGAAGCTTATGTTCCAGTTGATAGCTTCACCGTCAACTGTGGCTCAACTGGCAATTTCTCCGACGGTGAAAGGTCATGGAGCGGAGACATAGACTCAAAGTTCTTAAGTCTTCAAGACACAAAAACCATCGTTGCTCAACCAGCCACACAAGCTTCTCCGAACAAAGTTCCATATACCAGTGCTCGCTTGTCTAACTCTGAATTCAGTTACTCCTTCCCGGTCACAGTTGGCCGAAAATTTGTTCGTCTCTTCTTCTACCCTGCTTCTTACGCTGGCTTTGACCGTAATAACGCCTTCTTCACGGTCAAATCCGAGGGCTTCACACTCCTTAAGGATTTCAACGCTTCGCTCAACGCCGATGCTGCAAACAGGGACACCATCTTTAAAGAATACATAATCAACGTGGATGATGGGCAGAGGATCAACCTAACCTTCACTCCAAACACATCCCATCCAAATTCTTACGCGTTTGTGAATGGAATTGAAGTGGTGGCCATGCCCACTGATCTCTACTTCACTGAACCCAGCGGACAACAAGTTGTATTTGTGGGTCAGCCAGGCGCCGCATACACTATGCAAAACAGTAGCGCCCTGCAGACAGACTACAGAATCAAAGTTGGCGGCAACACAATCTCACCTAAAGCTGATACTGGCATGCTCCGGAATTGGGCAGGAGATGATGCTGATTATTTAAGAACGCCAAGTGCTCTGTATATGCTATTCGCTAATGAGACCGGAAAGATGAACATCACTGTGAGTCCTGATTATGAAGCACCCATTGAACTCTACAGAACATCACGTGAGATGGGCAAGAATGGAACTCTCAACCAAATGATAAATTTGACCTGGGAGTTTCCTGTTGATTCTGGCTTCACCTACATGCTCAGGCTTCACTTTTGCGAGCTAGACCCAAGCATTAATAAAACCGGTGACAGAGTGTTCAACATCTACATAGCAGGCCAGTTGGCGGAGGACCGTGCCAATGTTCTAAGATGGAGCAAACAAAAGGGAATTGCTGTACAGAGAGACTATGCAGTTACGATCCCAGGGACTACTCAAGACAAGTTTAACCTTTCACTCCAAATGCATCCTTCATCATTCGTATGGTACAGCGACCCTTTCTTGAACGGCCTTGAAATCTTCAAGATTAGTGACCCCGCTTCGAACAGCCTCGCCGGGCCGAACCCGAACCTGGCCAGTGTCCCGGGTCAACGCAACCCGCCAAAGTCAACCAACTCAAAGAGCAGCAACAAGGCGACTATAATCGGTGTCGTGGTGGGCGCAGCATGCGGCGTCGTTTTGCTCTCTGCTATCGCCTTCTTCCTCCTCAGCCGTCGCAACAAGACAAAGACGAGCGTTATCCTGAAGGACTCAAAGTCCAACAACACCTCCAAGTGGGGCCCACTCTCCTTCGCCACGACCAAGTCAACCAGCACACAGAAATCTTCACTCCCCTCCGATCTCTGCCGCCACTTCTCCCTCGTCGAGATCCGCGCCGCCACAAACAACTTCGACGACCTCTTCATCGTCGGTGCCGGAGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGAACCACCCCCGTCGCCATCAAGCGCCTCAAGCCAGGATCCCAGCAGGGAGAACACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTTCGCCACCTTCATCTCGTTTCGCTAATCGGTTACTGCAACGAGAGCAACGAGATGATCCTGGTCTACGATTTCATGGACCGTGGAACCCTCCGCGACCATCTCTACAACACCGAAAACCCTTCCATCAAATGGAAGCAGCGGTTACAGATCTGCATCGGTGCAGCGCGTGGACTACACTACCTTCATACAGGCGCGAAGCACACGATCATCCACCGAGACGTGAAAACCACGAATATCTTGTTGGATGATAAGTGGGTGGCTAAGGTTTCTGATTTTGGCTTATCGAGAATTGGGCCTACCGGTAATACTAAAGCCCATGTGAGCACAGTAGTGAAGGGTAGCGTTGGGTATTTGGATCCGGAGTACTATAAACGACAGCGTTTAACGGAGAAGTCTGACGTGTACTCTTTTGGTGTGGTGTTGTTTGAGATACTATGCGCAAGGCCGCCTCTGATCCGTACGGCTGAGAAGAAACAGGTATCGCTTGTTGATTGGGCGAGACACTGCTGGAACAACGGGTCGTTGGGTCAGATTGTGGACCCCGCTTTGAAAGGCTCTATTGCTCCCGAGTGTTTGAGGAAGTTCGGTGAGATTGCTGTTAGTTGTTTGTTGGATGATGGAACGCTGAGGCCGTCCATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGCTTCAAGAGAGTGCGGAGCAGCGTGACCGTGCGATTGGGATTGGGATGCCTGATGGTGATGATGAGGAGGATCGTGCGGTTGAGAAGAGAGAAGAGAGTGATGACATGTTTAGTAGTGGAACCAGCGTTGGGCAAGTTTCTGACTTTAACAAGAGTAGTGGTGTGAGTATGATGAGTAGTAGTGGAGATAATAGTTATGGTAATAAGGACACTGATAGGTTTTTGTCTGGGACTGTTTTCTCTGAGATTATGGATCCAAAGGCTCGCTGA	2709	0.4935	MNLKSYTYSITSAISTLLYLSFLFLSDLAISIEAYVPVDSFTVNCGSTGNFSDGERSWSGDIDSKFLSLQDTKTIVAQPATQASPNKVPYTSARLSNSEFSYSFPVTVGRKFVRLFFYPASYAGFDRNNAFFTVKSEGFTLLKDFNASLNADAANRDTIFKEYIINVDDGQRINLTFTPNTSHPNSYAFVNGIEVVAMPTDLYFTEPSGQQVVFVGQPGAAYTMQNSSALQTDYRIKVGGNTISPKADTGMLRNWAGDDADYLRTPSALYMLFANETGKMNITVSPDYEAPIELYRTSREMGKNGTLNQMINLTWEFPVDSGFTYMLRLHFCELDPSINKTGDRVFNIYIAGQLAEDRANVLRWSKQKGIAVQRDYAVTIPGTTQDKFNLSLQMHPSSFVWYSDPFLNGLEIFKISDPASNSLAGPNPNLASVPGQRNPPKSTNSKSSNKATIIGVVVGAACGVVLLSAIAFFLLSRRNKTKTSVILKDSKSNNTSKWGPLSFATTKSTSTQKSSLPSDLCRHFSLVEIRAATNNFDDLFIVGAGGFGHVYKGYIDGGTTPVAIKRLKPGSQQGEHEFMNEIEMLSQLRHLHLVSLIGYCNESNEMILVYDFMDRGTLRDHLYNTENPSIKWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGNTKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTAEKKQVSLVDWARHCWNNGSLGQIVDPALKGSIAPECLRKFGEIAVSCLLDDGTLRPSMNDVVWMLEFALQLQESAEQRDRAIGIGMPDGDDEEDRAVEKREESDDMFSSGTSVGQVSDFNKSSGVSMMSSSGDNSYGNKDTDRFLSGTVFSEIMDPKAR	902

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip10g03141	902	Pfam	Protein tyrosine and serine/threonine kinase	542	805	IPR001245	GO:0004672\|GO:0006468
	Aip10g03141	902	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	657	669	IPR008271	GO:0004672\|GO:0006468
	Aip10g03141	902	MobiDBLite	consensus disorder prediction	425	447	-	-
	Aip10g03141	902	PANTHER	OS07G0166700 PROTEIN	24	860	IPR045272	GO:0004714\|GO:0006468
	Aip10g03141	902	PANTHER	RECEPTOR-LIKE PROTEIN KINASE FERONIA	24	860	-	-
	Aip10g03141	902	ProSiteProfiles	Protein kinase domain profile.	536	811	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aip10g03141	902	Gene3D	Transferase(Phosphotransferase) domain 1	613	828	-	-
	Aip10g03141	902	ProSitePatterns	Protein kinases ATP-binding region signature.	542	565	IPR017441	GO:0005524
	Aip10g03141	902	Pfam	Malectin-like domain	43	415	IPR024788	-
	Aip10g03141	902	MobiDBLite	consensus disorder prediction	826	849	-	-
	Aip10g03141	902	CDD	STKc_IRAK	542	809	-	-
	Aip10g03141	902	Gene3D	-	40	199	-	-
	Aip10g03141	902	Gene3D	-	229	416	-	-
	Aip10g03141	902	Gene3D	Phosphorylase Kinase; domain 1	499	612	-	-
	Aip10g03141	902	MobiDBLite	consensus disorder prediction	826	884	-	-
	Aip10g03141	902	SUPERFAMILY	Protein kinase-like (PK-like)	509	811	IPR011009	-
	Aip10g03141	902	SMART	serkin_6	536	811	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aip10g03141	902	MobiDBLite	consensus disorder prediction	850	884	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip10g03141	Aip-Chr10	128921035	128924234	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip10g03141	30	902	Receptor kinase-like Gene Family	AT3G51550	50.111	0.0	811

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Aip10g03141		Malectin_like	5.5e-43	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip10g03141	-		-	gsj:114381619	1161.75