Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03129 ATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGGGAAATGCAACAATTATTAAAGCACAAGGAAATTCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCAACAAGAGTTATAGCGAAGCAACAAGATCTCAAAATCTCATGAAGGGTGCAGAGAGAGGATATGAGAGTTCGAGCACAATGCTTAGGCAGCAGCAGCAAGAACCGGAAACTCCTAAGAGAGCATCGAGTGTTGTAGCAAAGTTAATGGGACTGGAAGAACTCCCAGATTGCACACAAGCTTGCGATACTTCTTCGCAGATGTCTTGCATGAGTGATGGATATAACCAACACCAAAGTCCAATTTCCCCCATAACAAGAAACCAGTGCTTGGGGACTTTTAGAAGGGACAATGCCTTAATCAGAAATGCGACACCAGATTCACGATTTTCACTTGAACCAATCCCATGGAGGCAACCTGATGCAAGCCAAGATCCTGATTTACAAGTTTCCAAGGGAAGTGAGACTTTGACAACAGCTTCAAAACCCTCCCACTCTGTATATGGTGAAATTGAGAAAAGGATTGCAGATCTTCAGTTTAAAAATTCAGGAAAGGATCTCAGAGCCCTTAAGCAGATTCTGGAAGCAATGCAGAGATACAAAGATTCACTAGATATTACAAGAGACCAGGAAACAAATTACCCTTCTGACAGAGTTCTGAGTGAAAGCTCGGAATTACAGACCCCAAGACAACAGACCAACCCAACATTTGTCACTGATGATATTTCAAGTTCACCCCGGGGTAGAAAGTTTCCAATTATCATCATGAAGCCAGCACAAATCTCAAGGAAATCCAATGTCGCTACCAAAGAAATGACTAATGGCAAATCAGGCCGCATCAAGTTTTCTACCAATGATCCCAAAGATGGAAGATTGCTTGACAATATTGAAAGTCAAACCGCAAAAGGAACCGGTCCAACAAATCCTTTTAGTCAACGCTTCCATTCTGCAGATAAGAGTAATATGAAGAAAACTTCAAAATTAATGCAAGCCTCAAAAGTCCCTCAGGTCATCAATGGAGAGGACACCAATAACTCCAGCCATACAGCAGAGACTAGAAGCCCAAGAGTACAAAATAAGTTTGGTTTTGAGAAGCGTTCACCTACAAACCAATCATCAGAGTCCAAAAGTAAAAGAAGACAACACAAGCAATCATCAGAGTCATTGTCCCTAAGTTCCACCCCTAAGCAAAAAGTTTGTACCTTGCAGCAAAGAAATGAAGGCTTCAGCAAGATCCGGTGTCAAAAGAGGAACTTTAAGCATCAAGTTGATGTTATTTCCTCCAATGTTGACAGCAACAGAAGCATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACAGCATTTCCACTCAACAGGTGACTCACATGAATCAAAATGTAAGTATTTCTTCCTCCCATTATACAATGGTTGCCCATAAGCATAAAGTACTAGGTTTAATATTCTTTCATTGA 1539 0.4016 MXXXXXXXXXXXXXXXXXXREMQQLLKHKEIPRLSLDSREGSNKSYSEATRSQNLMKGAERGYESSSTMLRQQQQEPETPKRASSVVAKLMGLEELPDCTQACDTSSQMSCMSDGYNQHQSPISPITRNQCLGTFRRDNALIRNATPDSRFSLEPIPWRQPDASQDPDLQVSKGSETLTTASKPSHSVYGEIEKRIADLQFKNSGKDLRALKQILEAMQRYKDSLDITRDQETNYPSDRVLSESSELQTPRQQTNPTFVTDDISSSPRGRKFPIIIMKPAQISRKSNVATKEMTNGKSGRIKFSTNDPKDGRLLDNIESQTAKGTGPTNPFSQRFHSADKSNMKKTSKLMQASKVPQVINGEDTNNSSHTAETRSPRVQNKFGFEKRSPTNQSSESKSKRRQHKQSSESLSLSSTPKQKVCTLQQRNEGFSKIRCQKRNFKHQVDVISSNVDSNRSMDSHRDIEGTQADHSESNNSISTQQVTHMNQNVSISSSHYTMVAHKHKVLGLIFFH 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03129 512 MobiDBLite consensus disorder prediction 318 337 - -
Aip10g03129 512 PANTHER LONGIFOLIA PROTEIN 26 476 IPR033334 GO:0051513
Aip10g03129 512 MobiDBLite consensus disorder prediction 293 420 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 241 269 - -
Aip10g03129 512 Coils Coil 211 231 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 241 264 - -
Aip10g03129 512 Coils Coil 20 28 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 165 185 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 26 84 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 38 81 - -
Aip10g03129 512 Coils Coil 1 1 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 452 481 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 344 377 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 392 406 - -
Aip10g03129 512 MobiDBLite consensus disorder prediction 146 185 - -
Aip10g03129 512 PANTHER LONGIFOLIA PROTEIN 26 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03129 Aip-Chr10 128724188 128728854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03129 27 499 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 30.000 4.33e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03129 - - aip:107623626 916.376