Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03126 ATGGTGAAACAGAGATGTGAGACGGAGGCAGGAACCGAGATGACACCGGCGACGGTGGAACAGATGGTGCTTCCAGAGCTGAAACGACGACGATGGTGGAGAGCTGCAACAACCGCCACTATGCTACCCTCTCGATCCATTCACACTCCACACAAGTTTAGCAGGAGCTTCTTCCTCTCTCCATCCATGCTCTCTCCATCGCTCCGTCCACGCTCTCTCCATCGCTTTGATAACTCAGAGCTTATTCCTCTCTCTGTCCATGCTCTCTCCATCGCAGGAGCTTCTTTCACCGCCGCCACTCTCTCCATCGCTCCGTCCACGAAGAAGCTCCGTCACACCCCTTCCCGGATCTTCACCATGTGTTGCTCACGGAAGAAGAAAGAGCGGAAAAGAATGGGTGAGGAGAATAAGGTAGTTGGAGAAGGTGAGAAGAAGAAAGAGGAAAGTGTTGGTGCCACTGCTGTTGTTGGTGATGGAGAGGAGGAAAAGAATAAGAAGATGAAGAAGAAGGAAGCTGTGGTTATGTCCAAGGTCAATTGGAGAAACCGGTCGTGGCGGAGAACTTCGCGCCAGATCATCATAATTTCTGTTATATTTGAGGATGACGAGAGTCTAAGGAGATGGAAGGAACAACTTCTTGGTAATGTGGATGTGAACAATGTGACAGAGGTTCTGGAACCAGAAGTGAAAATAATAAGCCTTTCAATAGTGTCACCTGGAAGAGAGGACATAGTGCTTCCAATACCTGAGAATGGGAATCCAAAGGGTCTATGGACTGAGAATCAAGATGCTATAGATGCCGCAATTGTTGGTGCTCTGTGCAGGGACTGTAGGAAACAAGTGTACTTAGGTGGATTTGACACAGCACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGTTCCGTGGCATTGATGCAGATATCAATTTCAACGTCAGCGATTATGATGAAGATATAAAGCATATGAGTAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCATAGGCAGAGCATTGGTTTTTCGAGGGGTAGCTCCAAATACAGGGGAGTTACCTTGCACAAATGTGGTAGATGGGAAGCACGCATGGGGTAG 1101 0.4787 MVKQRCETEAGTEMTPATVEQMVLPELKRRRWWRAATTATMLPSRSIHTPHKFSRSFFLSPSMLSPSLRPRSLHRFDNSELIPLSVHALSIAGASFTAATLSIAPSTKKLRHTPSRIFTMCCSRKKKERKRMGEENKVVGEGEKKKEESVGATAVVGDGEEEKNKKMKKKEAVVMSKVNWRNRSWRRTSRQIIIISVIFEDDESLRRWKEQLLGNVDVNNVTEVLEPEVKIISLSIVSPGREDIVLPIPENGNPKGLWTENQDAIDAAIVGALCRDCRKQVYLGGFDTAHAAARAYDRAAIKFRGIDADINFNVSDYDEDIKHMSNFTKEEFVHILHRQSIGFSRGSSKYRGVTLHKCGRWEARMG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03126 366 SUPERFAMILY E set domains 200 255 IPR014756 -
Aip10g03126 366 SUPERFAMILY DNA-binding domain 277 315 IPR016177 GO:0003677
Aip10g03126 366 ProSiteProfiles AP2/ERF domain profile. 253 313 IPR001471 GO:0003700|GO:0006355
Aip10g03126 366 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 275 366 - -
Aip10g03126 366 SMART rav1_2 271 319 IPR001471 GO:0003700|GO:0006355
Aip10g03126 366 Gene3D AP2/ERF domain 253 315 IPR036955 GO:0003700|GO:0006355
Aip10g03126 366 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 275 366 - -
Aip10g03126 366 Pfam RHO protein GDP dissociation inhibitor 199 254 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03126 Aip-Chr10 128663104 128667329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03126 276 366 AP2-EREBP Transcription Factor Family AT2G28550 84.615 1.22e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03126 K09284 - gmx:100808212 173.711