Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03119 ATTCCTTCCAATGTTGGCGCAATATGCAAATCACTGAAATTTTTGGATGCATCCGGAAATCATATTTCGGGAGCAATTCCTGCCGGTTTTGGCGACGTGGTTTCTCTTGTTGCTCTTAACTTAAGTCGGAATCAATTACAAGGTCAAATTCCTTCCAGCCTTGGTCAATTGAAGGATCTAAGGTTTCTCTCTTTGGCACGCAATAATTTAAGTGGCTCGATTCCTTCAATCTTGGGGCAGTTGCACTACTTAGAAGTCTTGGACCTTTCTTCCAACTCGCTTACTGGTGAGATCCCTGAGGCTATTGTGAACATGAGAAACCTAACTGATGTGCTCCTCAACAACAACAAGCTTTCTGGCCACATACCTCCTGGTTTGGCTAGCCTCCGTACGCTCTCTGCATTTAATGTGTCTTTCAATAACTTATCTGGGTCCTTGCCATCACATAGCAGCTTAATTAAATGCAGCAGTGCTGTGGGGAATCCTCTTATACGTTCTTGTCGTGGATTTTCTCTCTCTGTGCAATCACCAGATCAACAAGGGCAAGCAACAGATAATTCTGAGAGTGCTGCACCAGAACAGGCTTCTAGCAGTAAGAGTGGGTTCAACTCCATTGAAATAGCATCCATAACTTCTGCATCAGCCATTGTTTCTGTTCTTATAGCGCTAGTGATTCTGTTCCTTTACACAAGGAAGTGGAAACCAATGTCCAGGGTTGCTGGGTCCACAAGAAAAGAAGTCATTGTCTTCACTGATATCGGGGTTCCATTGACATATGAAGATGTTGTCCGTGCCACTGGGAATTTCAATACAAGCAACTGTATTGGGAATGGAGGGTTTGGGACAACCTACAAGGCAGAGATATCACCAGGGACTTTGGTGGCAGTCAAACGCCTGGCAATTGGACGCTTTCAAGGTGGCAATCTGGAAAAATTTATCCAGGAGAGGTCAACAAGAGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTAGACATAGCCCGTGCACTTGCCTACCTGCATGATCAGTGTGTACCTCGAGTTCTTCATCGAGATGTCAAGCCCAGCAACATCTTGTTGGATGATGATTTCAATGCGTATCTGTCCGACTTTGGATTGGCCAGGCTTCTGGGTACTTCAGAGACCCATGCTACCACTGGTGTAGCAGGAACATTTGGTTATGTGGCTCCTGAATATGCCATGACATGCCGTGTTTCTGATAAGGCTGATGTGTATAGTTATGGTGTTGTGCTTCTAGAGCTGCTCTCAGACAAGAAAGCATTGGATCCTTCATTCTCCTCTTATGGGAATGGCTTCAACATAGTAGCATGGGCATGCATGTTACTGAGGCAAGGAAGGGCTAAGGAGTTCTTCACTGCCGGGTTGTGGGATGCAGGACCAGGAGATGATTTGGTAGAAGTCCTACACTTGGCAGTTGTGTGCACGGTGGACTCGCTCTCTACCAGACCGACGATGAAACAAGTTGTGAGACGGCTTAAACAACTTCAGCCCCCATCATGCTAG 1524 0.458 IPSNVGAICKSLKFLDASGNHISGAIPAGFGDVVSLVALNLSRNQLQGQIPSSLGQLKDLRFLSLARNNLSGSIPSILGQLHYLEVLDLSSNSLTGEIPEAIVNMRNLTDVLLNNNKLSGHIPPGLASLRTLSAFNVSFNNLSGSLPSHSSLIKCSSAVGNPLIRSCRGFSLSVQSPDQQGQATDNSESAAPEQASSSKSGFNSIEIASITSASAIVSVLIALVILFLYTRKWKPMSRVAGSTRKEVIVFTDIGVPLTYEDVVRATGNFNTSNCIGNGGFGTTYKAEISPGTLVAVKRLAIGRFQGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWDAGPGDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03119 507 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Aip10g03119 507 Pfam Protein kinase domain 305 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03119 507 SUPERFAMILY L domain-like 9 149 - -
Aip10g03119 507 Gene3D Ribonuclease Inhibitor 1 179 IPR032675 -
Aip10g03119 507 MobiDBLite consensus disorder prediction 174 198 - -
Aip10g03119 507 Pfam Leucine Rich Repeat 84 104 IPR001611 GO:0005515
Aip10g03119 507 SMART serkin_6 269 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03119 507 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 304 - -
Aip10g03119 507 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 305 506 - -
Aip10g03119 507 Pfam Leucine rich repeat 11 70 IPR001611 GO:0005515
Aip10g03119 507 Gene3D Transferase(Phosphotransferase) domain 1 304 504 - -
Aip10g03119 507 ProSiteProfiles Protein kinase domain profile. 191 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03119 507 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 1 304 - -
Aip10g03119 507 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 305 506 - -
Aip10g03119 507 SUPERFAMILY Protein kinase-like (PK-like) 255 500 IPR011009 -
Aip10g03119 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03119 Aip-Chr10 128557902 128559548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03119 1 507 Receptor kinase-like Gene Family AT3G02130 68.525 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Aip10g03119 Pkinase 2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03119 - - gmx:100819882 798.505