Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03101 ATGAAGCACCGCCACCAACCCCAACCCTTTATCATATACGTGGTGGTTGTGTTACCTAATCTGATCAGATTACCCAAAATCAAGAAAAACAGAAACCTACGAAAGGAGAGTAGAAGCGCGCAAACCCCTGTTCTCTGCTCCGCCGTGTGCCGCTGTGTCACCCTGGAATCGCGTGGCTGCCGACCCATCCTCCTCTCACCGCCATCGACCGTTCCCCTCTACTCTACAGTGCGTGAAACCCCTAATCCCTCCTCCACGGTGTGCGAAACCCACCCCTGTTCTCTGCTCCACCGTGTGCGTTTGTGCCATCTTTCAATCGCGTGGTTGCCCAGACATCCTCCTCTCACCGTTCTCGACCGTACCCTCTCCTCCACCCCTTACTCCCTCCTCTATCGTGCGCGATCTGAGCTATCGCGACCTCTCCCCTGGTTCATTCTTCCATCCAATTTGTTCCCTATTTTCATCAAAATTGTCTACATCTTCTCGGTTCAGATTATGCTTTCAGGACGTGGAATAAAGTCGCTTAGTAATTTGGTTATTCAACTTAGGGAAGTCTGTAACCATCCTGACCTCTTAGAGTATGCCTTTGATGGTTCATGGCTTTATCCTCCTGTAAATGAGATAGTTGAACAATGTGAAAATTTTCGTTTGCTTGAACGGCTGTTGAAAAGGTTATTTGCAAGAAAACACAAAGTTTTGATATTCAGTCAGTGGACCAAAGTGTTAGACATACTGGATTACTATTTTAGTGAGAAAGGCTTTGAAAACTTGGAAGTTACCTCCAAGCTGAAGCAGATTGTACAAAAGCAATTAACTTTGACAAAAAGAATGTCAAAGTGTATTTTAGAAGAGGTAGAGCTAGAGAGATGCTTGGCTACTATACCGATGCAATTGATGGTCAGCTATTTTTCTTTGCACAACACAGCTTGGAAGATTAGAAGTTGCAAAGAAAGTCTGCGGAAGCTTGAGGAACAACCTGAATGGTTGAGGGGTGGAAAGCTCTGCGGAAAGCTCTGTGATTATCATGTTTGTAGTTGGAGAAATGATACAAATGTCATTTTAGCTGATGAAATAGGTCTTGGTAAAATTGTTCAGTCAGTTTCAATGCTTGGTTTTCTACAGAATGCCCAGCAAATCCATGGCCCTTTTCTTGTAGTTGTACCATTGTCTACTTTATCAGACTGGCTAAGTATGCTAACTGCCAAGTGA 1209 0.4442 MKHRHQPQPFIIYVVVVLPNLIRLPKIKKNRNLRKESRSAQTPVLCSAVCRCVTLESRGCRPILLSPPSTVPLYSTVRETPNPSSTVCETHPCSLLHRVRLCHLSIAWLPRHPPLTVLDRTLSSTPYSLLYRARSELSRPLPWFILPSNLFPIFIKIVYIFSVQIMLSGRGIKSLSNLVIQLREVCNHPDLLEYAFDGSWLYPPVNEIVEQCENFRLLERLLKRLFARKHKVLIFSQWTKVLDILDYYFSEKGFENLEVTSKLKQIVQKQLTLTKRMSKCILEEVELERCLATIPMQLMVSYFSLHNTAWKIRSCKESLRKLEEQPEWLRGGKLCGKLCDYHVCSWRNDTNVILADEIGLGKIVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSDWLSMLTAK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03101 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 269 IPR027417 -
Aip10g03101 402 Pfam SNF2-related domain 338 397 IPR000330 GO:0005524|GO:0140658
Aip10g03101 402 PANTHER ATP-DEPENDENT DNA HELICASE DDM1-LIKE ISOFORM X1 167 264 - -
Aip10g03101 402 Gene3D - 344 397 IPR038718 -
Aip10g03101 402 Gene3D - 162 277 IPR027417 -
Aip10g03101 402 PANTHER SNF2/RAD54 HELICASE FAMILY 328 397 - -
Aip10g03101 402 PANTHER ATP-DEPENDENT DNA HELICASE DDM1-LIKE ISOFORM X1 328 397 - -
Aip10g03101 402 PANTHER SNF2/RAD54 HELICASE FAMILY 167 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03101 Aip-Chr10 128348486 128351894 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip10g03101 SNF2_N 1.4e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03101 K19001 - ahf:112784595 471.085