Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03098 atggagGAGCAGTTCACCATCGTCGCGTCTGCTGTTGCAATCAATGGGGCTCGTCCTCAGGGGAGCATCACCGACGTCACTGCTAGTGAACCGTCTTTGGGAAAAGAGACTTCTCGTGGTAAGCAATTAGAGTCAGACATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAACAATGCAGCTTTCAATGGGGATCGTGTTGCTTCTTTACTTGTTAGAGAAGGAGCCGCCATGAAGATAGAAGATGGCGGTAGTTTTCTATGCACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGCTACTGTCTAATGGCATGGATCCCAACTTGAAAGATTATGATTACCGAAGCCCTTTGCACGTTGCTGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCCAGTGTTTTTACCAAGGACAGCTAA 459 0.4488 MEEQFTIVASAVAINGARPQGSITDVTASEPSLGKETSRGKQLESDITFHIGKQEAELALKVNNAAFNGDRVASLLVREGAAMKIEDGGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFMAKLLLEAGASVFTKDS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03098 152 ProSiteProfiles Ankyrin repeat region circular profile. 120 152 - -
Aip10g03098 152 PANTHER POTASSIUM CHANNEL AKT1 37 70 IPR045319 GO:0005249|GO:0006813
Aip10g03098 152 SUPERFAMILY Ankyrin repeat 65 151 IPR036770 -
Aip10g03098 152 ProSiteProfiles Ankyrin repeat profile. 120 152 IPR002110 GO:0005515
Aip10g03098 152 Pfam Ankyrin repeats (3 copies) 64 151 IPR002110 GO:0005515
Aip10g03098 152 Gene3D - 58 152 IPR036770 -
Aip10g03098 152 PANTHER POTASSIUM CHANNEL AKT1 70 151 IPR045319 GO:0005249|GO:0006813
Aip10g03098 152 PANTHER POTASSIUM CHANNEL SKOR 37 70 - -
Aip10g03098 152 PANTHER POTASSIUM CHANNEL SKOR 70 151 - -
Aip10g03098 152 ProSiteProfiles Ankyrin repeat region circular profile. 87 118 - -
Aip10g03098 152 SMART ANK_2a 87 116 IPR002110 GO:0005515
Aip10g03098 152 SMART ANK_2a 120 149 IPR002110 GO:0005515
Aip10g03098 152 ProSiteProfiles Ankyrin repeat profile. 87 119 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03098 Aip-Chr10 128202483 128204587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03098 72 151 Ion Channels AT5G37500 68.750 5.71e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03098 K21867 - gmx:100814385 161.384