Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03058 ATGAGTGCAATTGTGCAAGGGACTGACGTGTTTCCGGCGAGGAGGGGAGCTTGCTGCTGCGATGATAACCAACTTTACCCTCTCTCCAACTCCAGTTCTCAATCCATCACTTCCTCACCCCAACCCGAAGCCCTAATCTCTTCCTTCACCTCCTCCACTTCCTCTTCTTCCTCCAAGCTTGATTCGCTCCACCAACTCACTCGACTCGCCAAGCGCGACTCACTCTTCCGTCGCCGTCTCATCGACTCGAAAATTGTCACGCTATTACTCTCCTGCGTCGAGTCCCACGACCACAATTTTCTCCGTGAGAATGTTCTCTCTTTACTTCTCAATCTCAGCTTCGATGACCACAACAAGGTTGGACTCATTGTTGAGGGAGTCGTTGCCCGCCTCGTCGCCGTCATCTCCGGCACCGCTGCCGGAAATCTATCCCCGAACTATCATACCCTCGTAAGGGACGAAAAGGAAGAAGGAAGCTGCGACAACCCTCTATGCTCTCTGCTTTGCTGTTGA 513 0.5263 MSAIVQGTDVFPARRGACCCDDNQLYPLSNSSSQSITSSPQPEALISSFTSSTSSSSSKLDSLHQLTRLAKRDSLFRRRLIDSKIVTLLLSCVESHDHNFLRENVLSLLLNLSFDDHNKVGLIVEGVVARLVAVISGTAAGNLSPNYHTLVRDEKEEGSCDNPLCSLLCC 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03058 170 PANTHER U BOX DOMAIN-CONTAINING 30 139 - -
Aip10g03058 170 SUPERFAMILY ARM repeat 44 135 IPR016024 -
Aip10g03058 170 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 8 30 139 - -
Aip10g03058 170 Gene3D - 17 155 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03058 Aip-Chr10 127574605 127575394 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03058 29 135 U-box Gene Family AT4G21350 48.598 3.37e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03058 - K25388 aip:107646845 204.142