Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip10g03050 | ATGTCTTTGCTTTTGGAGCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAATGGTGGTGATGAAATCAAGGGACTTATAGCTTTGTTTCATCAAGTTTTTTATCAACTAGATCCTAAAGGTGGTCTTAAAGAACTAGTGGATCCTAGGCTTGGGGATAATTTAGGCTTGGAGATAATTACTCAATTGATTCAGTTTTCAAGAGCTTTTTGGTCCAATCCCTTCAACTTTTTGCTTCGAGTTCAGGTTGTTGTAGATTCAGAAGACTTAGCTGCGAATCATGATGTCATGCAGATAGTTGAGAACCGAGTATTGATCTTTGTTTTGTACAAAATGGAAACCACACGAGTTGAAAGGATGCTTCAACAAGGAGGTTGGAAGGTTGTGTCCATACATGGAGACAATGCACAACATGATCGTACAAAGGCACTTTCATTATTCAAGAATGGGAGCTGCCCTTTAATGATTGCTACTGATGTGGCTGCATGTGGATTGGATATTCCAGATGTTGAAGTTGTTATCAACTATAGTTTTCCTTTAACTACAGAAGATTATGTTCATAGAATTGGTCGGACTAGACGAGCTAATAAAAAGGGTGTTGCCCATACATTCTTCACACAGCAGAATAAGGTGGTATCCATGCCCGATGTATTTGAGGTTCTTCATTTGCCTGTCATGCTGTTTCTCAACTTTTTTTCGCCACTATTGGATGGAAATATTCAGGGTCTTGCTGGGAAGCTTGTGAATGTATCAAGAGAAGCTGGACAAATTATGCCAGATGCCCTTTTAAAATTTGGCACACATGTAAAGAAAAAGTTCCACTACCACCGCCACCGCCACCGCCGCCACCCTCAATCGCTTTTGGATGAGGACTATGATGATGATGAGGATGAAGATGACACTGAAGACTATAGCTGA | 921 | 0.4028 | MSLLLELYELISAKEAVINGGDEIKGLIALFHQVFYQLDPKGGLKELVDPRLGDNLGLEIITQLIQFSRAFWSNPFNFLLRVQVVVDSEDLAANHDVMQIVENRVLIFVLYKMETTRVERMLQQGGWKVVSIHGDNAQHDRTKALSLFKNGSCPLMIATDVAACGLDIPDVEVVINYSFPLTTEDYVHRIGRTRRANKKGVAHTFFTQQNKVVSMPDVFEVLHLPVMLFLNFFSPLLDGNIQGLAGKLVNVSREAGQIMPDALLKFGTHVKKKFHYHRHRHRRHPQSLLDEDYDDDEDEDDTEDYS | 306 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip10g03050 | 306 | PANTHER | BNAA08G07020D PROTEIN | 102 | 213 | - | - | |
Aip10g03050 | 306 | Gene3D | - | 84 | 221 | IPR027417 | - | |
Aip10g03050 | 306 | MobiDBLite | consensus disorder prediction | 291 | 306 | - | - | |
Aip10g03050 | 306 | Pfam | Helicase conserved C-terminal domain | 101 | 197 | IPR001650 | - | |
Aip10g03050 | 306 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 84 | 243 | IPR027417 | - | |
Aip10g03050 | 306 | PANTHER | BNAA08G07020D PROTEIN | 242 | 285 | - | - | |
Aip10g03050 | 306 | CDD | SF2_C_DEAD | 84 | 206 | - | - | |
Aip10g03050 | 306 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 96 | 240 | IPR001650 | - | |
Aip10g03050 | 306 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 242 | 285 | - | - | |
Aip10g03050 | 306 | MobiDBLite | consensus disorder prediction | 277 | 306 | - | - | |
Aip10g03050 | 306 | SMART | helicmild6 | 116 | 197 | IPR001650 | - | |
Aip10g03050 | 306 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 102 | 213 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip10g03050 | Aip-Chr10 | 127428080 | 127431590 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip10g03050 | 63 | 205 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 29.560 | 3.55e-16 | 76.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip10g03050 | K14811 | - | gmx:100806057 | 260.381 |