Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03050 ATGTCTTTGCTTTTGGAGCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAATGGTGGTGATGAAATCAAGGGACTTATAGCTTTGTTTCATCAAGTTTTTTATCAACTAGATCCTAAAGGTGGTCTTAAAGAACTAGTGGATCCTAGGCTTGGGGATAATTTAGGCTTGGAGATAATTACTCAATTGATTCAGTTTTCAAGAGCTTTTTGGTCCAATCCCTTCAACTTTTTGCTTCGAGTTCAGGTTGTTGTAGATTCAGAAGACTTAGCTGCGAATCATGATGTCATGCAGATAGTTGAGAACCGAGTATTGATCTTTGTTTTGTACAAAATGGAAACCACACGAGTTGAAAGGATGCTTCAACAAGGAGGTTGGAAGGTTGTGTCCATACATGGAGACAATGCACAACATGATCGTACAAAGGCACTTTCATTATTCAAGAATGGGAGCTGCCCTTTAATGATTGCTACTGATGTGGCTGCATGTGGATTGGATATTCCAGATGTTGAAGTTGTTATCAACTATAGTTTTCCTTTAACTACAGAAGATTATGTTCATAGAATTGGTCGGACTAGACGAGCTAATAAAAAGGGTGTTGCCCATACATTCTTCACACAGCAGAATAAGGTGGTATCCATGCCCGATGTATTTGAGGTTCTTCATTTGCCTGTCATGCTGTTTCTCAACTTTTTTTCGCCACTATTGGATGGAAATATTCAGGGTCTTGCTGGGAAGCTTGTGAATGTATCAAGAGAAGCTGGACAAATTATGCCAGATGCCCTTTTAAAATTTGGCACACATGTAAAGAAAAAGTTCCACTACCACCGCCACCGCCACCGCCGCCACCCTCAATCGCTTTTGGATGAGGACTATGATGATGATGAGGATGAAGATGACACTGAAGACTATAGCTGA 921 0.4028 MSLLLELYELISAKEAVINGGDEIKGLIALFHQVFYQLDPKGGLKELVDPRLGDNLGLEIITQLIQFSRAFWSNPFNFLLRVQVVVDSEDLAANHDVMQIVENRVLIFVLYKMETTRVERMLQQGGWKVVSIHGDNAQHDRTKALSLFKNGSCPLMIATDVAACGLDIPDVEVVINYSFPLTTEDYVHRIGRTRRANKKGVAHTFFTQQNKVVSMPDVFEVLHLPVMLFLNFFSPLLDGNIQGLAGKLVNVSREAGQIMPDALLKFGTHVKKKFHYHRHRHRRHPQSLLDEDYDDDEDEDDTEDYS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03050 306 PANTHER BNAA08G07020D PROTEIN 102 213 - -
Aip10g03050 306 Gene3D - 84 221 IPR027417 -
Aip10g03050 306 MobiDBLite consensus disorder prediction 291 306 - -
Aip10g03050 306 Pfam Helicase conserved C-terminal domain 101 197 IPR001650 -
Aip10g03050 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 243 IPR027417 -
Aip10g03050 306 PANTHER BNAA08G07020D PROTEIN 242 285 - -
Aip10g03050 306 CDD SF2_C_DEAD 84 206 - -
Aip10g03050 306 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 96 240 IPR001650 -
Aip10g03050 306 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 242 285 - -
Aip10g03050 306 MobiDBLite consensus disorder prediction 277 306 - -
Aip10g03050 306 SMART helicmild6 116 197 IPR001650 -
Aip10g03050 306 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 102 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03050 Aip-Chr10 127428080 127431590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03050 63 205 Eukaryotic Initiation Factors Gene Family AT3G19760 29.560 3.55e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03050 K14811 - gmx:100806057 260.381