Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03033 ATGCCGACAGACAGCCACTCGCCGGCGCGGCCAACCATCACCCTGCCGCCGCGTCCCAGCCTGGAGTCCTTCCTGTCGTCGGTAGGAATAAGCCCCGGTCCCATGACTCTGGTGTCGTCGTTCTTTGCGGACGACTACTCCCCTTCACCTTCTTCCTTCTCTCAGCTCCTGTCGGTTACGCCGTCTCCTCTCTTCACCGTGCCACCTGGCTTCAGCCCTTCCGCCTTCCTCTTCTCCCCTACTCACCCTCAGAGCCCCTTTGGGATGTCACATCAGCAGGCTTTAGCACAGGTTACCACTGAAGCTGTGATAGCACAATCACAAGGGCAAATGCAGATTGATGAAGATGATGCTTCAGAGAAGAATGTAGAAGTATCTATGTTTGAAACTTCTCATATGTCCAATAATGCTGACAAGAAGTATCAGCAGCCTTCGTCCGTGGTGGCCGACAAGCCTGCGGACGATGGCTATAACTGGCGAAAATATGGACAGAAACAGGTTAAGGGGAGTGAGTTTCCACGGAGCTACTACAAGTGTACACATCTGAGTTGCAATGTGAAGAAAAAGGTTGAGCGTGCCATTGATGGTCACATAACAGAAATCATCTATAAAGGGCAGCATAACCATGAAAAGCCTCATTCTAATAAGCGTAATAAAGATAACAATGATTCAAATGAAAGTGTAAGCATTCAGCCTAAGTCTGAGTTGAGTTCACAAGGTTGTTGGGTTGGAAATTCAGATAGTTTTGGCAAAGGCTTTTCTGATTGTTCGATCAGCGAAGACTTGGGTGGTGTAGATATGAGGGAAGAAGAAGGAGATGATGTTGAACCAAACCCCAAGAGAAGGAACATTGATGTTGGGGTTTATGAAGCACATCAAACGACTGTGACAGAACCCAAAATCATTGTCCAAACAAAAAGCGAAGTTGATCTTTTGGATGATGGCTACAAGTGGCGCAAGTATGGGCAGAAAGTGGTGAAGGGTAATCCTCATCCAAGGAGCTATTACAAATGCACAAGTGCAGGGTGCAACGTGCGAAAGCACATCGAGAGAGCTTCAATGGATCCTAAAGCAGTGATAACAACTTATGAGGGAAAACATAATCATGATGTGCCTGCTTCCAGAAAGAGCAGCCATAACAGTTCAAAGCCGCATAAAGCGGTACCTGAGAAGCAATCGGATATGGATTTCGAAAACAGCAACCAAAGACCGATACATTTAAGCTTGAAAGAAGAGCAAATCATAGTATGA 1251 0.466 MPTDSHSPARPTITLPPRPSLESFLSSVGISPGPMTLVSSFFADDYSPSPSSFSQLLSVTPSPLFTVPPGFSPSAFLFSPTHPQSPFGMSHQQALAQVTTEAVIAQSQGQMQIDEDDASEKNVEVSMFETSHMSNNADKKYQQPSSVVADKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHLSCNVKKKVERAIDGHITEIIYKGQHNHEKPHSNKRNKDNNDSNESVSIQPKSELSSQGCWVGNSDSFGKGFSDCSISEDLGGVDMREEEGDDVEPNPKRRNIDVGVYEAHQTTVTEPKIIVQTKSEVDLLDDGYKWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHIERASMDPKAVITTYEGKHNHDVPASRKSSHNSSKPHKAVPEKQSDMDFENSNQRPIHLSLKEEQIIV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03033 416 PANTHER WRKY PROTEIN 62 415 - -
Aip10g03033 416 PANTHER WRKY PROTEIN 7 58 - -
Aip10g03033 416 SUPERFAMILY WRKY DNA-binding domain 150 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 415 IPR044810 GO:0003700
Aip10g03033 416 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 58 IPR044810 GO:0003700
Aip10g03033 416 MobiDBLite consensus disorder prediction 383 397 - -
Aip10g03033 416 MobiDBLite consensus disorder prediction 204 239 - -
Aip10g03033 416 ProSiteProfiles WRKY domain profile. 307 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 ProSiteProfiles WRKY domain profile. 148 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 MobiDBLite consensus disorder prediction 366 405 - -
Aip10g03033 416 MobiDBLite consensus disorder prediction 224 239 - -
Aip10g03033 416 SMART WRKY_cls 312 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 SMART WRKY_cls 153 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 MobiDBLite consensus disorder prediction 204 223 - -
Aip10g03033 416 MobiDBLite consensus disorder prediction 130 149 - -
Aip10g03033 416 Pfam WRKY DNA -binding domain 313 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 SUPERFAMILY WRKY DNA-binding domain 304 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 Gene3D WRKY domain 136 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g03033 416 Gene3D WRKY domain 297 373 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03033 Aip-Chr10 127180925 127184232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03033 9 414 WRKY Transcription Factor Family AT2G03340 44.990 3.76e-122 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip10g03033 WRKY 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03033 - - aip:107622739 822.002