Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03029 ATGGATGGACCAACTGGCCGAGGTAGTGGAACAGGTGTAGACATGTTTCTGCCAAATTATAAGCTGGGAAAAACACTTGGTATTGGGTCCTTTGGCAAAGTGAAAATAGCAGAGCATGTTTTGACTGGCCATAAAGTTGCCATAAAGATTCTTAACCGCCGCAAGATTAAGAACATGGAAATGGAAGAAAAAGTAAGAAGAGAAATAAAAATTCTGAGATTGTTCATGCATCCTCACATCATCCGTCTTTATGAAGTCATAGAAACGCCAACAGACATATATGTTGTTATGGAATATGTAAAATCAGGAGAACTATTTGATTATATAGTAGAAAAGGGCAGGCTGCAAGAAGATGAAGCCCGCAACTTTTTCCAGCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTACATAGAGACCTGAAACCTGAGAATTTGCTTTTAGACTCCAAATGCAATGTCAAGATTGCTGATTTTGGTTTAAGCAACATCATGCGGGATGGCCACTTTCTGAAGACAAGTTGTGGGAGCCCTAATTATGCTGCTCCAGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTCTATATGCCCTTCTCTGCGGCACACTTCCCTTTGATGATGAAAACATTCCAAACCTCTTCAAGAAAATAAAGGGTGGCATATACACCCTTCCTAGTCATCTATCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTGGATCCCATGAAGAGGATGACTATACCTGAAATACGTCAACACCCATGGTTCCAAGCTCGTCTTCCGCGATATTTAGCAGTGCCACCACCAGATACAATGCAACAAGCCAAAAAGATTGACGAAGAGCTACTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTCTACGCAACAGGATCCAAAATGAGGGTACTGTGGCATACTACTTGTTATTGGATAACCGGTTCCGTGTTTCTAGCGGCTATCTTGGAGCTGAGTTTCAAGAGACTATGGATGCTGGTTTCAATCGTAATCATTCCACTGAAGTTTCTTCTCCAGTTGCTGGGCACCGCTTTCCAGGTTATATGGACTATCAAGTAGGAATGAGACCACAGATCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGGTGCAGTGTTTTACTTCTTGGCTATTTACACAACTGGATTCATCTGTTAACAATTCTCTGCATAGTAACCATTACTTTGGGAATGACTCCAACATCATTGAGAATGATGCTGTTTCTAAGTCAAATGTGGTCAAGTTTGAAGTGCAGCTCTACAAAACTCGGGAAGATAAGTATCTGCTTGACCTTCAGAGGGTTCAGGGCCCCCAGTTTCTTTTCTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTACGTGTTCTCTAA 1455 0.4241 MDGPTGRGSGTGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDAGFNRNHSTEVSSPVAGHRFPGYMDYQVGMRPQIPVERKWALGLQVQCFTSWLFTQLDSSVNNSLHSNHYFGNDSNIIENDAVSKSNVVKFEVQLYKTREDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03029 484 Pfam Protein kinase domain 20 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03029 484 PANTHER SERINE/THREONINE KINASE 9 408 - -
Aip10g03029 484 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 403 483 - -
Aip10g03029 484 SUPERFAMILY Protein kinase-like (PK-like) 17 274 IPR011009 -
Aip10g03029 484 Pfam Kinase associated domain 1 441 483 IPR001772 -
Aip10g03029 484 Gene3D Kinase associated domain 1, KA1 395 482 - -
Aip10g03029 484 ProSiteProfiles Protein kinase domain profile. 20 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03029 484 PANTHER SERINE/THREONINE KINASE 403 483 - -
Aip10g03029 484 SUPERFAMILY KA1-like 330 483 IPR028375 -
Aip10g03029 484 CDD UBA_SnRK1_plant 295 335 - -
Aip10g03029 484 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 408 - -
Aip10g03029 484 CDD STKc_AMPK_alpha 17 273 - -
Aip10g03029 484 SUPERFAMILY UBA-like 283 332 IPR009060 GO:0005515
Aip10g03029 484 Pfam UBA/TS-N domain 295 331 IPR015940 -
Aip10g03029 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Aip10g03029 484 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Aip10g03029 484 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 294 334 IPR015940 -
Aip10g03029 484 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 435 483 IPR001772 -
Aip10g03029 484 SMART uba_6 296 333 IPR015940 -
Aip10g03029 484 SMART serkin_6 20 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03029 484 Gene3D Transferase(Phosphotransferase) domain 1 11 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03029 Aip-Chr10 127111049 127115193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03029 20 273 CBL-interacting serine-threonine protein kinases AT4G24400 52.549 1.55e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Aip10g03029 Pkinase 3.8e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03029 K07198 - gmx:100796687 862.448