Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03003 ATGAGTGACGAACAATCAGATTCTGCAATGATGAATCCGTGGGATATCAGAGACCCGTGGGATATGATAGACTTTGATGCCGATGAACCACGGCAGTTTCAGTTTGAGTCTCCGCCTCTGCCTGAGCCCGTCTGGAATGGGGACGAAAACAATGTAGGTGATCCCCAGCCCCAGCCGTGTGCCATGGACGTTAGTGGTAATCAACCACCTCAGCCGGTTATTGATGAGTGTTTTCCGGAAGCTATGAAGAGGACAGAACACTATTATGGAAGCCATCAACCACTTCAGTCTCAGCCTCAGTCATGTGCCATTGACGTGTGTGGTAATCAACCACCTCAGCTACCGTCTCAGCCTCACCCTTGGTCTTGGCCACTTCAGTCTGAACCTCAGCCGTGTGCCATTGACGTGTGTGGTAATCAACCTCCTCAGCTACCATCTCAGCCTCAGTCTTGGTCTCGGCCACTTCAGTCTCAGCCTCAGCCATGTGCCATTGACATGTGTGCCTCAGCCTTGGTCTTGGCCTCGGCCTCAGCCTCGGTCTGGCCTTGGCCTCAGCCTTGTTCTCAGCCTTGGTCTCGGTCTCGGCCTCGGCTTCTTTCTGAGTCTCGGCCTCCGTCTCAGACGAATATAGAACATGTTAGAGCTGATTCCCAATGTCGGTGGTCATCAACCACTTCAACCTCAACTCGGGTCTGGACTTGGGAGGAGAACAAAGCTTTTGAGTCAGTTATTACCAGTTGTTTTCAGGATGCTCTACACAACCACTGGGAGGCAGTGGCTGCTCGTCTCCCCGGCAGGACCCCGGCACAGCTGCAAGAACGCTTTCAGAAGCTGATGAACGACATCAGTGCCATCCATAACGGTTATCCTACAAACACTCCTCTCAATGCTGCATCTAATAACATGACCATCATGATGGAACACAACCCTCTCTCCATCATCAATCCACCACCACCACCATTACCACCTTATTCGACCGATCATCAACATCACAAGTCGGGAGGAGGTACTGCTGGCTGCAGAGGAGGAGGTCGTGCCAACTGCAGGGGAGGAGGCAGCACCAATGAAGACAGGATATCATTGGACCAAAGATGA 1095 0.5224 MSDEQSDSAMMNPWDIRDPWDMIDFDADEPRQFQFESPPLPEPVWNGDENNVGDPQPQPCAMDVSGNQPPQPVIDECFPEAMKRTEHYYGSHQPLQSQPQSCAIDVCGNQPPQLPSQPHPWSWPLQSEPQPCAIDVCGNQPPQLPSQPQSWSRPLQSQPQPCAIDMCASALVLASASASVWPWPQPCSQPWSRSRPRLLSESRPPSQTNIEHVRADSQCRWSSTTSTSTRVWTWEENKAFESVITSCFQDALHNHWEAVAARLPGRTPAQLQERFQKLMNDISAIHNGYPTNTPLNAASNNMTIMMEHNPLSIINPPPPPLPPYSTDHQHHKSGGGTAGCRGGGRANCRGGGSTNEDRISLDQR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03003 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 283 IPR017930 -
Aip10g03003 364 MobiDBLite consensus disorder prediction 317 364 - -
Aip10g03003 364 ProSiteProfiles Myb-like domain profile. 232 279 IPR001005 -
Aip10g03003 364 CDD SANT 232 279 IPR001005 -
Aip10g03003 364 MobiDBLite consensus disorder prediction 1 64 - -
Aip10g03003 364 Pfam Myb-like DNA-binding domain 230 278 IPR001005 -
Aip10g03003 364 Gene3D - 223 290 - -
Aip10g03003 364 SUPERFAMILY Homeodomain-like 215 285 IPR009057 -
Aip10g03003 364 SMART sant 228 281 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03003 Aip-Chr10 126512085 126513602 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip10g03003 Myb_DNA-binding 4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03003 - - aip:107613987 429.098