Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03000 ATGATAGCTGCTATAGTTTTTAATACATCAGAGAGTTCATTGGATACTATGAATGAATGGCTCAATATGGTTCAGTCAATTCAGATTCCTTTTGTACTCATTCCACTTCTTACATTGGTGTCTAAAGAAGAGGTCATGGGAACTTTTAGAATAGGCCCTATGGTAGAGCTGCCACCACCACCACAAGCGCGTCGTGCCACTGCTCTGTTCCGCCATCCGCGGTTCCGCCGTCCGCCTTTTCTCGCCGTGACCCAGCTCTGTTCTTCTCCGTTCTCTGGGTACCCTCAAGCTAACATTGTACTAGGATCTGGATCACTTATCGGGCGTATTCTATCTTTACCTTCTACTGCTCTAAATGTGCCAAACAATAGGATGCATCCTCTTTCTCTTAGCTCTCTGCAGGAAGAAAGACTAAGAAATTTGAGGCACTGGCTTGAAGTGCCCTTTGATGGTTCCAAAACAGAGCACAAGTATGTGGTTAATGCAAGTTTTGTAATTTTCAAATCAATATTCTGA 516 0.438 MIAAIVFNTSESSLDTMNEWLNMVQSIQIPFVLIPLLTLVSKEEVMGTFRIGPMVELPPPPQARRATALFRHPRFRRPPFLAVTQLCSSPFSGYPQANIVLGSGSLIGRILSLPSTALNVPNNRMHPLSLSSLQEERLRNLRHWLEVPFDGSKTEHKYVVNASFVIFKSIF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03000 171 Pfam Natural resistance-associated macrophage protein 3 52 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip10g03000 171 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 56 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip10g03000 171 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03000 Aip-Chr10 126393555 126397115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03000 1 56 Inorganic Solute Cotransporters AT1G47240 73.214 2.54e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03000 K21398 - aip:110268449 153.295