Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02987 ATGGTCCTAGGAATTGGATGGACAACAACTCTTCTTTATAGGGATGGGAAAGAGAAGGTGCTTCTTCTGTCTCTTGGTATTGGTGTGTGGATTGTCTTCTATGCTTGCAAGCGTGTGTATCAGGTTGCATGCAATTATCCACACGAGAACATAACATTCAAGATAGATGAGAGTAGCAGCAACCCTAATTACTTGGCATTTGTGATTTGGTATCAACAGGGAATTAGAGACATAACTGCTGTCCTGCTTTGTGAGACTGAGAACTTTGAGTGCAAGTTGCTAGATCGGAGCCATGGTGCAGTGTGGACTTGCACCTGCGGCATTGATGGCATTGATGGGATTGATTAG 348 0.4397 MVLGIGWTTTLLYRDGKEKVLLLSLGIGVWIVFYACKRVYQVACNYPHENITFKIDESSSNPNYLAFVIWYQQGIRDITAVLLCETENFECKLLDRSHGAVWTCTCGIDGIDGID 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02987 115 Gene3D - 43 109 IPR036749 -
Aip10g02987 115 PANTHER EXPANSIN-LIKE B1 40 107 - -
Aip10g02987 115 PANTHER EXPANSIN-B3 40 107 - -
Aip10g02987 115 Pfam Expansin C-terminal domain 51 105 IPR007117 -
Aip10g02987 115 SUPERFAMILY PHL pollen allergen 50 106 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02987 Aip-Chr10 126160718 126162884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02987 41 102 Expansin Gene Family AT4G38400 37.097 2.31e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02987 - - oeu:111387061 114.39