Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02962 ATGACTCCAACAAAACCTGGAATGGGGATCCCTGTTGCTATAAAATCTCTCAACCAATTTGGTCTTCAGGGCCATCAAGAATGGCTGGCTGAAGTAAACTATCTGAGTCAGCTAAAGCACCCAAATTTAGTGAAACTAATTGGATTTTGCAATGAAGATGATAAGATGCTGCTTGTTTATGAGTTCATGCCTCGTGGAAGCCTTGAATCCCATCTCTTTAGGAGAGCTGTGGTGTTTCCATGGTCCATCAGAGTGAGAATAATGCTTGATGCTGCAAAGGGACTTGCATATCTTCATGAGAAGACTCAGAATAAGAATGCAGTCATTTTTCGAGACTTCAAGACTTCTAATGTTCTCTTGGACACGGAGTTCCATGCAAAGCTATCGGACTTTGGTTTTGCAAGGGATGGACCTGAGGGAGATAAAACTCACATATCAACTAGAGTCATGGGAACCCATGGCTATGCTGCCCCAGAATATGTCATGAATGGGCACCTGAGCACGAAGAGTGATGTGTATAGTTTTGGAGTGGTGATGCTAGAGATGGTGACAGGAAGGAAGGTGATAGACAGACAGAGGCCACATAGTGAGATGAACTTGGTGAGATGGGCACTGCCCTTAATAAGGGACAATGGAAGGAACAGCCATATACTCCTCATTGACCCAAGGCTTCATGGGCATTACTCCGCAAAGGCTTCCCTTAAGGCACTTAAGTTGGCCTCTCGCTGCCTCCGCTTCAACCCTTCCATGAGACCTACCATGGATTCAGTTGTTCAATCCATCATCAACTTCCCTCAAGAAGCCTCACCTCTTCCAATTCCTCCTCCTCCTCCTCCTCATCTTAATACTAACTCCAACAAGTATGGTCTTGTTTCTTCTGCTTCTGCTTCCAGGACCAACGTGCCCACTCGCTTTCAGGCTTCGCCGTGCCACCTCAACCACCACCACCAAGCTCATGTTGCTTCAACTTCATCAACTCCACCAAGGCCTAATGTTAGAATTGATCAAAGGCGTTGA 1017 0.4602 MTPTKPGMGIPVAIKSLNQFGLQGHQEWLAEVNYLSQLKHPNLVKLIGFCNEDDKMLLVYEFMPRGSLESHLFRRAVVFPWSIRVRIMLDAAKGLAYLHEKTQNKNAVIFRDFKTSNVLLDTEFHAKLSDFGFARDGPEGDKTHISTRVMGTHGYAAPEYVMNGHLSTKSDVYSFGVVMLEMVTGRKVIDRQRPHSEMNLVRWALPLIRDNGRNSHILLIDPRLHGHYSAKASLKALKLASRCLRFNPSMRPTMDSVVQSIINFPQEASPLPIPPPPPPHLNTNSNKYGLVSSASASRTNVPTRFQASPCHLNHHHQAHVASTSSTPPRPNVRIDQRR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02962 338 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 309 - -
Aip10g02962 338 Gene3D Phosphorylase Kinase; domain 1 4 63 - -
Aip10g02962 338 MobiDBLite consensus disorder prediction 314 338 - -
Aip10g02962 338 SUPERFAMILY Protein kinase-like (PK-like) 9 291 IPR011009 -
Aip10g02962 338 MobiDBLite consensus disorder prediction 317 331 - -
Aip10g02962 338 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02962 338 Pfam Protein kinase domain 11 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02962 338 PANTHER OS01G0588500 PROTEIN-RELATED 2 309 - -
Aip10g02962 338 Gene3D Transferase(Phosphotransferase) domain 1 64 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02962 Aip-Chr10 125431499 125436258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02962 9 261 Glycoside Hydrolase AT3G07070 51.953 5.29e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip10g02962 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02962 - - ahf:112786408 655.595