Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02944 ATGGGGTTTGGGAATAATAAGAATAGTAGTAGCAGCAGCAGCAACCACAACAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATGTTATTAAAGCTGGAAGTTTGGATGTGGGAAAATCAAAGGGAAGGAAGAAGGGAGAGAATGAGAAAGGGTGGTGGCCTAAATTTAGTTTCTTTGGGAGTTGCATACCTTCAAGATCGAAGGTTGTTACCTCCATTAGTGGCACTACTTCTACTCAAACTGAAATCAAATCTGTGTCAGAGAGTTGCACGAAAGAAACTGTTGCTCCTCCAGAGTCCACTATGACAACAACAAGCAATGAAGAGAGTATTCCTTCCACTCCAAAAGTCAGTGAGGAGTTGAAGGTAGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAGGTGGCAACTCGGAATTTCAGACCGGAGAGTCTTCTTGGAGAGGGAGGGTTTGGTTGTGTATTCAAGGGTTGGATTGAGGAGAATGGAATTGCACCTGTTAAACCGGGTACCGGTCTTACCGTTGCAGTCAAGACCCTGAACCACAATGGAAATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAACTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATAGAAGATGACCAGAGATTATTGGTTTACGAGTTTATGCCCCGAGGCAGTTTGGAGAATCACCTCTTTAGAAGGCCCCTACCGCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTTCATGAAGAGGCTCAGAGGCCAATAATCTATCGCGATTTCAAGACATCCAATATCCTATTGGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGCCCTGAGGGGGAAAAGACACATGTATCAACAAGAGTCATGGGAACATATGGTTATGCTGCTCCGGAGTATGTCATGACCGGACATTTGACATCAAAAAGTGATGTCTACAGTTTCGGAGTGGTGCTTCTTGAAATGCTCACTGGCCGCCGAGCAATCGATAAGAGAAGACCAAATGGAGAACACAATCTGGTTGAGTGGGCTAGACCTGTTCTCGGAGATCATAGGATCCTATTCCGGATAGTCGATCCCCGGCTTGAAGGGCACTTCTCGGTTAAAGGTGCACAGAAAGCTGCCCAGCTAGCTGCTCAATGCCTTAGCCGCGACCCGAAATCCAGACCTTTGATGAGTGAAGTTGTTCAAAGTTTAAAGCCATTGCCAAACCTTAAGGATATGGCCATTTCTTCTTACCACTTCCAGGTCACGCGAGTCGAGCGTACTTTCTCCATGCCAAATCATAAAAACGGCATCAAAACGCAGTTAGTAGCTTTACCAAAGAAAGGTCAACCTGTAAGGACATTGTCAACTCCAAATGTTCCACATGGTTCTCCATATCTTAATTATAGCAAGTCTCCAAAACCAAAGGAGTAA 1500 0.432 MGFGNNKNSSSSSSNHNNNNNNNNNNNNNNNNVIKAGSLDVGKSKGRKKGENEKGWWPKFSFFGSCIPSRSKVVTSISGTTSTQTEIKSVSESCTKETVAPPESTMTTTSNEESIPSTPKVSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGIAPVKPGTGLTVAVKTLNHNGNQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKRRPNGEHNLVEWARPVLGDHRILFRIVDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVQSLKPLPNLKDMAISSYHFQVTRVERTFSMPNHKNGIKTQLVALPKKGQPVRTLSTPNVPHGSPYLNYSKSPKPKE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02944 499 PANTHER OS01G0588500 PROTEIN-RELATED 79 491 - -
Aip10g02944 499 MobiDBLite consensus disorder prediction 1 52 - -
Aip10g02944 499 MobiDBLite consensus disorder prediction 1 37 - -
Aip10g02944 499 MobiDBLite consensus disorder prediction 474 488 - -
Aip10g02944 499 MobiDBLite consensus disorder prediction 91 119 - -
Aip10g02944 499 CDD STKc_IRAK 152 429 - -
Aip10g02944 499 Gene3D Phosphorylase Kinase; domain 1 126 231 - -
Aip10g02944 499 SUPERFAMILY Protein kinase-like (PK-like) 121 426 IPR011009 -
Aip10g02944 499 ProSitePatterns Protein kinases ATP-binding region signature. 152 184 IPR017441 GO:0005524
Aip10g02944 499 Pfam Protein kinase domain 149 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02944 499 Gene3D Transferase(Phosphotransferase) domain 1 232 447 - -
Aip10g02944 499 MobiDBLite consensus disorder prediction 91 118 - -
Aip10g02944 499 PANTHER RECEPTOR-LIKE KINASE PLANT 79 491 - -
Aip10g02944 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Aip10g02944 499 ProSiteProfiles Protein kinase domain profile. 146 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02944 499 MobiDBLite consensus disorder prediction 471 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02944 Aip-Chr10 124938370 124942561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02944 132 442 Glycoside Hydrolase AT3G07070 55.414 2.78e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip10g02944 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02944 - - gmx:100499647 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02944 10 124938370 124942561 Aip04g03205 04 126077281 126080967 PCT