Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02931 ATGTTTGTATATGCAATATACGAGCAATTCTTCCCACCTTCCCTTCGAACCTACATCCGAAAACACACACAAACCTTCACTAACTTTTTCTACCCTTACATCCAAATCACCTTCCCGGAGTTCTCCGGCGAAAAGCTCCGCCGCAGCGACGCCTACACTTGTATCCAGACTTACCTCAGCGAAAACTCCTCCAAAACTGCCAAACGGCTCAAAGCCGAAGTCGTCAAAGACAGTCAAACGCCGCTCGTGCTGAGCATGGCCGACAACGAAGAAATCACGGACGAGTTTAACGGCGTCAAAGTCTGGTGGTACTCCAACCACACCACACCAAAAACGCAGTCGTTTTCGTTCTACCCTGCTTCCGACGAGAAGCGGTTCTTAACCCTGACGTTTCATCGGCGGCACCGCGATCTCATCACCGGCTCTTACATCAATCACGTGTTGGATGAGGGCAAAGCGATTTCCACGAAGAACCGCCAGTTGAAGCTCTACACGAACAATCCAAGTGATAACTGGTACGGATACAAACGCACCAAGTGGAGTCACATAGTTTTCGAGCACCCTGCGCGGTTCGAGACTCTGGCCATGGATCCGAAGAAGAAACAAGAAATCTTAAACGATCTTGTTAAaagaagaaatgggggttctgggtacaatcttggtttatCTTGGAAGAGGGGTTACTTGCTGTACGGTCCTCCAGGGACTGGAAAGTCAACAATGATAGCGGCCATGGCGAATTTCATGAACTATGATTTGTATGATCTTGAATTGACGGCGGTGAAGGACAACACTGAGCTTAGGAAGCTGCTAATCGAGACGCCGAGTAAATCGATCATTGTGATCGAAGACATCGATTGCTCGTTGGATCTTACAGGACAGAGGAAGAAGAAGAAGAAGGAGAAAGAGGAGGATGAAGATCAAAAGGATCCTATGAAGAGAGCACAAGAAGAAGAGAATAAGGGAAGTAAGGTAACGCTTTCGGGGCTGTTGAACTTCATTGATGGGATTTGGTCTGCGTGTGGAGGGGAGAGGATTATAATCTTCACGACGAATTTCATCGATAAGCTTGATCCAGCATTGATAAGGAGGGGAAGGATGGACAAGCATATTGAGCTTTCTTACTGCGGTTTCGAAGCGTTTAAGGTTCTTGCAAAGAACTATTTGGATGTTGAGACTCATGGCTTGTTTCCGGTTATTGAGAGGAAGTTGGTTGAGACTGATATGACGCCTGCTGATGTTGCTGAGAATCTTATGCCCAAGTCTGTTGATGAAGGTGTTGAGGATTGCTTGTTGAATTTGATTAAGGCCCTTGAGATTGCAAAAGAAGAAGAAGCAGTAAAAAAGGCTCAAGAAGAAGCAAGGAAAAAAGAAGAGGAAGATGAAAAAGAAGTAAAGGATAAAGAGGTGAAGAACAATGAAAAAGCTAGTGAAGATGTGAAAGAAAATGGTTTTCATTGA 1461 0.4428 MFVYAIYEQFFPPSLRTYIRKHTQTFTNFFYPYIQITFPEFSGEKLRRSDAYTCIQTYLSENSSKTAKRLKAEVVKDSQTPLVLSMADNEEITDEFNGVKVWWYSNHTTPKTQSFSFYPASDEKRFLTLTFHRRHRDLITGSYINHVLDEGKAISTKNRQLKLYTNNPSDNWYGYKRTKWSHIVFEHPARFETLAMDPKKKQEILNDLVKRRNGGSGYNLGLSWKRGYLLYGPPGTGKSTMIAAMANFMNYDLYDLELTAVKDNTELRKLLIETPSKSIIVIEDIDCSLDLTGQRKKKKKEKEEDEDQKDPMKRAQEEENKGSKVTLSGLLNFIDGIWSACGGERIIIFTTNFIDKLDPALIRRGRMDKHIELSYCGFEAFKVLAKNYLDVETHGLFPVIERKLVETDMTPADVAENLMPKSVDEGVEDCLLNLIKALEIAKEEEAVKKAQEEARKKEEEDEKEVKDKEVKNNEKASEDVKENGFH 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02931 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 421 IPR027417 -
Aip10g02931 486 SMART AAA_5 224 377 IPR003593 -
Aip10g02931 486 Gene3D - 372 438 - -
Aip10g02931 486 MobiDBLite consensus disorder prediction 293 321 - -
Aip10g02931 486 MobiDBLite consensus disorder prediction 447 486 - -
Aip10g02931 486 ProSitePatterns AAA-protein family signature. 345 364 IPR003960 GO:0005524|GO:0016887
Aip10g02931 486 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 1 467 - -
Aip10g02931 486 PANTHER BCS1 AAA-TYPE ATPASE 1 467 - -
Aip10g02931 486 Coils Coil 435 476 - -
Aip10g02931 486 Gene3D - 179 371 IPR027417 -
Aip10g02931 486 Pfam ATPase family associated with various cellular activities (AAA) 229 374 IPR003959 GO:0005524|GO:0016887
Aip10g02931 486 CDD AAA 225 375 - -
Aip10g02931 486 Pfam Domain associated at C-terminal with AAA 11 105 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02931 Aip-Chr10 124398537 124447287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02931 220 373 Calmodulin-binding Proteins AT3G56690 27.160 3.51e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02931 10 124398537 124447287 Aip04g03194 04 125899376 125903962 PCT