Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02923 ATGGATCTCAAAAAACTCTTACTCTTCCTTTGTGTCTTAACCCCAGTCCTCTCTTCCTCACAGGGAACCGAAGAAGACGACGTGAAGTGTCTCAAAGGAATCAAGGACACTCTCCAAGACCCTCAGGGCCGACTCGCCACGTGGCGCTTCGGAAACACAACCGTCGGTTTCATCTGCGACTTCGTCGGCGTCACCTGCTGGAACCTCAAAGAGAATCGCGTCCTGGCTCTCGACCTTCAAGGCATGAAGCTCTCCGGTCAAATCCCTAGCTCCCTCAAATTCTGCGGTAAGAATATCCAGAAGCTGGATCTCGGTTCAAATTCTCTTTCTTCCAATATACCGCCCGAGATCTGCACCTGGATGCAGTTTCTCGTTTCGTTAGATCTCTCCGATAACCAACTTACCGGTCCGATTCCGCCTACTCTTGCTAACTGTACTTACTTGAATGAGCTTGTGCTTAATGATAACGAACTTTCTGGAACCATTCCGTACCAGCTTGGAAGTTTGACTAGGTTGAAGAAGTTATCTGTTGCTAATAACCGTCTTAGCGGAACGGTTCCTTCGTTCTTCAACGGTTTTGATAAGGATGGTTTCGATGGCAACGATGACCTTTGTGGTGGCCCGCTTGGCAACTGCGGTGGCATGAGCAAGAGGAATCTTGCTATAATTGTGGCTGCCGGTGTTTTCGGTGCTGCTGCGTCGTTGCTTTTGGCGTTTGGATTGTGGTGGTACTATCATTTGAGGGTCGGTGGGAGGAGGAAGAAGGGGTTTAGTGGTGGTGGTGGCGGTGGCGGTGGTGGTGGCAATGATTGGGTTGTGAGGTTGAGAGGGCATAAGCTTGTTCAGGTTACGCTTTTTCAGAAGCCGATTGTGAAGGTTAAATTGGGAGATTTAATGGCTGCGACGAATAATTTTAGTGCGGAGAATGTTTTGATTTCGACGAGGACTGGGACTACTTATAAGGCGGATTTGCCGGACGGTTCGGCTCTGGCAGTGAAGAGGTTGAGTGCTTGTAAGATTGGGGAGAAGCAGTTTAGGATGGAGATGAATAGGTTGGGGCAGGTGAGGCACCCGAATTTGGCACCATTGTTGGGTTTCTGTGTAGTGGAGGATGAGAGGTTGTTGGTTTATAAGCACATGTCAAATGGGACTCTTTATTCCTTGCTGCACAAGAATGGAGGGTTGTTGGATTGGATCATGAGGTTTAGGATTGGGGTTGGCGCTGCGAGGGGGCTAGCGTGGCTTCACCATGGCTGCCACCCTCCAATTATTCAGCAAAACATTTGTTCCAATGTGATCCTCGTCGACGAGGATTTCGATGCTAGGTTGATGGATTTCGGGCTTGCCAGGCTCATGGCATCGGATTCAAATGGGAGTTTCGTGAATGGGGATTTGGGGGAGTTAGGGTATATTGCACCGGAGTACTCGAGTACCTTGGTTGCTTCATTGAAAGGGGATGTGTATGGATTTGGGGTTTTGCTTTTGGAATTGGTCACAGGGCGAAAACCACTCGATGTTAGCAACGGGGAGGATGAGTTTAAGGGAAACTTGGTGGATTGGGTGAACATGCATTCGAGTATGGGCCGACTCAAGGACTGCATTGATAAGGCCATAGCCGGAAGGGGGCAGGACGAGGAGATCCTGCAGTTTCTGAAAATTGCATCTAATTGTGTGGTTAATCGCCCCAAGGATAGGTGGTCCATGTACAAGCGGAGAGGTTTTCAGAATGGTCCTGATGGTTTTTCTGATTTGAACAATTTCCATGGCTGGCACCTAATCAGGATTTCTGGAGTAATGCCTCTCATTCGAAATCTCAAATAG 1821 0.4876 MDLKKLLLFLCVLTPVLSSSQGTEEDDVKCLKGIKDTLQDPQGRLATWRFGNTTVGFICDFVGVTCWNLKENRVLALDLQGMKLSGQIPSSLKFCGKNIQKLDLGSNSLSSNIPPEICTWMQFLVSLDLSDNQLTGPIPPTLANCTYLNELVLNDNELSGTIPYQLGSLTRLKKLSVANNRLSGTVPSFFNGFDKDGFDGNDDLCGGPLGNCGGMSKRNLAIIVAAGVFGAAASLLLAFGLWWYYHLRVGGRRKKGFSGGGGGGGGGGNDWVVRLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYKADLPDGSALAVKRLSACKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEDERLLVYKHMSNGTLYSLLHKNGGLLDWIMRFRIGVGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLDVSNGEDEFKGNLVDWVNMHSSMGRLKDCIDKAIAGRGQDEEILQFLKIASNCVVNRPKDRWSMYKRRGFQNGPDGFSDLNNFHGWHLIRISGVMPLIRNLK 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02923 606 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Aip10g02923 606 Pfam Protein kinase domain 317 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02923 606 Gene3D Transferase(Phosphotransferase) domain 1 380 573 - -
Aip10g02923 606 PANTHER OS07G0107800 PROTEIN-RELATED 5 570 - -
Aip10g02923 606 PANTHER - 5 570 - -
Aip10g02923 606 Gene3D Ribonuclease Inhibitor 24 213 IPR032675 -
Aip10g02923 606 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
Aip10g02923 606 SUPERFAMILY L domain-like 25 194 - -
Aip10g02923 606 SUPERFAMILY Protein kinase-like (PK-like) 282 569 IPR011009 -
Aip10g02923 606 ProSiteProfiles Protein kinase domain profile. 305 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02923 Aip-Chr10 124296738 124298873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02923 6 570 Receptor kinase-like Gene Family AT3G28450 62.281 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Aip10g02923 Pkinase 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02923 - - gmx:100810378 873.233