Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02917 ATGAGAGAAGAGGAAGAACATAACCTAAATGCAGAGACTAACGGACTGAAGAAGAAGAAGAAATGGGGGTTCTGGGTACAATCTTCGTTTATATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCACCAGAGGAAGACATGCTCTTATGTGAGGCTCAAAAATTATATGGCAACAGATGGACAGAAATAGCGAAAGTGGTTTCAGGAAGAACGGATAATGCTGTGAAAAATCGCTTCTCTATGCTCTGCAGAAAGAGGCAAAAATATGAAGCTTTAGCTAAAGAGAACAGCATTTCATCACACATCAATTCAAATAACAAGAAAATTGTTTTCCAACATGCTTATAATACAGATGCAACATCAGAATCTGCTATATCTATCAAGAAAATGAGGAGGGCTCATATCACAGATGATGGAGGGAAGATCAAGTTTGGAGATAGATCACATTTGCAAAATGGAACTTTGATAAATCAGCATCCAAGGACACCATTCGCAGTATTAGCTCAAAACTCACAAAACATAAACAATTTGCTAGACGAGCTTCAAATTTGCAATGCCAAGTTTAGTAGTTCTGGAACATTCCTAAAAAGGGATGACCCAAAAATAGATGCATTAATGCAACAAGCAGAGTTGCTGAGCTCACTAGCTCAAAATATTGATACAGAGGACATGGACCAAAGTCTTGAAAACACGTGGAAG 711 0.3797 MREEEEHNLNAETNGLKKKKKWGFWVQSSFIWYTYLNSDFKKGGWSPEEDMLLCEAQKLYGNRWTEIAKVVSGRTDNAVKNRFSMLCRKRQKYEALAKENSISSHINSNNKKIVFQHAYNTDATSESAISIKKMRRAHITDDGGKIKFGDRSHLQNGTLINQHPRTPFAVLAQNSQNINNLLDELQICNAKFSSSGTFLKRDDPKIDALMQQAELLSSLAQNIDTEDMDQSLENTWK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02917 237 Gene3D - 44 119 - -
Aip10g02917 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Aip10g02917 237 SUPERFAMILY Homeodomain-like 32 95 IPR009057 -
Aip10g02917 237 SMART sant 41 89 IPR001005 -
Aip10g02917 237 Pfam Myb-like DNA-binding domain 42 84 IPR001005 -
Aip10g02917 237 PANTHER TRANSCRIPTION FACTOR MYB88 31 232 - -
Aip10g02917 237 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Aip10g02917 237 PANTHER MYB PROTEIN-RELATED 31 232 - -
Aip10g02917 237 CDD SANT 45 83 IPR001005 -
Aip10g02917 237 Coils Coil 171 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02917 Aip-Chr10 124107362 124110040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02917 32 237 MYB Transcription Factor Family AT2G02820 57.009 1.04e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip10g02917 Myb_DNA-binding 7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02917 K09422 - gmx:100803361 314.309