Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02914 ATGGATGTGGATAATAATCATAATAGTGTTGGTGCCATGGCTAGTAGTAGGAAGAAGAAGAAGAAGAAGAAGAATGGGTCAATAAGTTCAATTTTCATGCATGCAGATACCAAAGACTGGTTTTTCATGCTCTTTGGTTTGTTGGGGGCAATTGGAGATGGATTAACCACACCTTTGGTCTTGTTCATCACTAGCAAGATGATGAACAACCTTGGAAGTTTTTCTAATCTTGATGGAGGTGGTGCTTTCACTCAGAACATAAACAAGAATGCAGTGGCTTTGTTATATTTGGCATGTGGGTCTTTTGTTGCTTGCTTCTTGGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTACAAGAATGAGAGGCAGATATTTAAAGGCAGTACTAAGACAAGAAGTGGCATACTTTGATTTGCATGTTACAAGCACTTCAGAGGTCATCACCGGTGTCTCCAATGATAGCCTTGTAATTCAAGATTGTGTTAGTGAAAAGGTATGA 507 0.3945 MDVDNNHNSVGAMASSRKKKKKKKNGSISSIFMHADTKDWFFMLFGLLGAIGDGLTTPLVLFITSKMMNNLGSFSNLDGGGAFTQNINKNAVALLYLACGSFVACFLEGYCWTRTGERQATRMRGRYLKAVLRQEVAYFDLHVTSTSEVITGVSNDSLVIQDCVSEKV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02914 168 Pfam ABC transporter transmembrane region 43 167 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g02914 168 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 44 168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g02914 168 SUPERFAMILY ABC transporter transmembrane region 32 165 IPR036640 GO:0005524|GO:0016021
Aip10g02914 168 MobiDBLite consensus disorder prediction 1 22 - -
Aip10g02914 168 Gene3D ABC transporter type 1, transmembrane domain 21 168 IPR036640 GO:0005524|GO:0016021
Aip10g02914 168 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 29 168 IPR039421 -
Aip10g02914 168 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 29 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02914 Aip-Chr10 123961072 123962448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02914 17 168 Calmodulin-binding Proteins AT2G36910 32.237 1.60e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02914 K05658 - aip:107621466 330.102