Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02906 ATGTCCACTGGAAAGCAGGGAAGAGATAGTGAAATCCGAGAAAACAAAGAGAAAGAGAGGGAAGAGTGCCGGTGGAAGGGGGGAAGACGCACCGGAGCTCGTGGGCTATTCCGCCGCTCTTCGTCACGGCTGAGGCTGTCGTCGCCGCAGATGCGTCCGTGCCGTTGTGTGTTGCCGTCAGAGGAAGAGGAGCGCGAACCAGAGCCATGCAAGGGAGGAGCAAAGCACGCACAGGGGAGAAGCCACTGTTGCCGTTGCATCTTGCCGCCGCTGCCACTGCTGAGGTCACCATCGTCGTCCTCACCGCAAGCAGAGTCACCGCCATCCATGGTGGAACTGAGGACAGAGAGTGCCCGAAGAGAGGAGACTGACAGAGGAGGAGTGCGACGTGAGGAAGGAGACGATGTTTACGTCACTGCCGCCAAATCTCACCACTGCTGCTGGAGCCTCTGGCCGTCGGGACCGCCTTTCTTACCACCGCTGATGAAGCTCATCGGAGTTGCTCAAAGGTTACTATCGCTCTACTTGGTTCTGTTGGAACCTGCGTTGCTGCGGGTGTGGTTGCCGAAAACTGCCACCGGAACCCATGTCTTCTGGATTGGTCGGTTAGATGGTATGCAGCAATCGTTGATGATGGTGGATACGGGTTCTGTGTCAAGAAGTGTTGGTTCCCTTGTGAATATGATGCCAGAAAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAAAAGTGAGGATGGAAGGCTTAGTCGTGTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTGGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAATTTTCTTTACTGGTGCCAAATTGGCTATAAGTGA 885 0.5311 MSTGKQGRDSEIRENKEKEREECRWKGGRRTGARGLFRRSSSRLRLSSPQMRPCRCVLPSEEEEREPEPCKGGAKHAQGRSHCCRCILPPLPLLRSPSSSSPQAESPPSMVELRTESARREETDRGGVRREEGDDVYVTAAKSHHCCWSLWPSGPPFLPPLMKLIGVAQRLLSLYLVLLEPALLRVWLPKTATGTHVFWIGRLDGMQQSLMMVDTGSVSRSVGSLVNMMPEKDDDGRFASGGWKSEDGRLSRVCLFGIFDGHGSSGAAEYLKEHLFDNLMKHPNFLYWCQIGYK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02906 294 Gene3D - 196 287 IPR036457 -
Aip10g02906 294 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 248 286 - -
Aip10g02906 294 SUPERFAMILY PP2C-like 250 285 IPR036457 -
Aip10g02906 294 MobiDBLite consensus disorder prediction 114 131 - -
Aip10g02906 294 PANTHER ALPHABET, ISOFORM E-RELATED 248 286 - -
Aip10g02906 294 ProSitePatterns PPM-type phosphatase domain signature. 255 263 IPR000222 GO:0043169
Aip10g02906 294 MobiDBLite consensus disorder prediction 1 53 - -
Aip10g02906 294 MobiDBLite consensus disorder prediction 96 131 - -
Aip10g02906 294 MobiDBLite consensus disorder prediction 7 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02906 Aip-Chr10 123733158 123735693 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02906 211 286 PP2C-type Phosphatase Gene Family AT5G53140 50.485 1.99e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02906 K17506 - gmx:100805795 124.405