Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02901 ATGGTTGATCGTGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAAGGATGACATTTGGGGTATTGAGCATGATAGTGTAGAGCAGTGTGTTCAATTCTACAAAAATTATGCCAAAGTACATGGTTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAACGGAAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACAGAGAAAGAAGTATCTGGAGATGGAGAATAGGAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCCAGAATTAGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTTATCCCACCTAAATATATACAATTTGTCCCCGCATATCGCGTAATGACCGAGGCCAACAAAGCACAAGCCAACAGTCTGCATGATTATGTGTGA 468 0.3996 MVDRGDGFGEVEKKLTELTKDDIWGIEHDSVEQCVQFYKNYAKVHGFVARCDEKGYDFNGNLNMRQMVCNREGTQRKKYLEMENRKRDHRPITRVMCQARIRFHYDMKLRKWKVTAFEETHNHDLIPPKYIQFVPAYRVMTEANKAQANSLHDYV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02901 155 Pfam FAR1 DNA-binding domain 36 126 IPR004330 -
Aip10g02901 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 19 140 - -
Aip10g02901 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02901 Aip-Chr10 123623789 123624256 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02901 FAR1 9.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02901 - - adu:107487303 323.939