Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02900 ATGGATCCACCACTTTGTGCCAATGGTTGCGGCTTCTATGGTTCTGCTGCCAACAACAATCTTTGTTCAAAGTGTTACAAAGATCACATCAAAGAAACCTTCATCATCATGGAATCACAAAGCAATAATAATAATAATAATAATGGAACATTATTAGATGATACCAAATCTCATCATGACCAACCATTAGCTGATGTGTTAAAAAGATTTACCAAAGACTTTGCTGCAACCATTGATGATATTTCTACCAACAACAACAATGAAACGAAGAAAAGGTGCAAGAAGTGCAATAAAAAGGTTGGATTAATAGGGTTTGAGTGTCGATGTGGAGATTTGTTTTGTGGAAAGCATAGGTATCCAGAAGTTCATGAATGTGAATTCAATTTTAAGGATATTGGTCGCAACATTTTGGCAAAACAGAACCCTCTTTGCATTCGCGATAAGTTAGATGAAAGACTTTAG 462 0.355 MDPPLCANGCGFYGSAANNNLCSKCYKDHIKETFIIMESQSNNNNNNNGTLLDDTKSHHDQPLADVLKRFTKDFAATIDDISTNNNNETKKRCKKCNKKVGLIGFECRCGDLFCGKHRYPEVHECEFNFKDIGRNILAKQNPLCIRDKLDERL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02900 153 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 152 - -
Aip10g02900 153 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Aip10g02900 153 Pfam AN1-like Zinc finger 93 128 IPR000058 GO:0008270
Aip10g02900 153 SUPERFAMILY AN1-like Zinc finger 81 145 IPR035896 -
Aip10g02900 153 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 152 - -
Aip10g02900 153 Gene3D - 72 146 IPR035896 -
Aip10g02900 153 ProSiteProfiles Zinc finger AN1-type profile. 87 133 IPR000058 GO:0008270
Aip10g02900 153 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 33 - -
Aip10g02900 153 Gene3D - 1 51 - -
Aip10g02900 153 SMART AN1_Zf_4 93 130 IPR000058 GO:0008270
Aip10g02900 153 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Aip10g02900 153 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02900 Aip-Chr10 123465596 123466057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02900 5 151 C2H2 Transcription Factor Family AT3G52800 36.774 3.54e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02900 - - adu:110276973 278.485