Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02892 ATGTTTCGCCTTCTGCCCCAACGATTCTCGGATACTTGTGTGATCTTCGATAATTTTTGCAAGGAAGAGGATATGGCTGCGCATGCTTCTTCTGAGATTATTAAGTATGATGTCTTCCTCAACTTCAGAGGCACAGACACTCGCCGTGGTTTTCTCAGCAATCTGCGCAAGGCTTTAGAGGACAAGCACATCAAGACATACGTGGATTACATGCTTAGAGAAGGAACTGAAATATCACACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTTTATGCTTCTTCCAAATGACCCATCATGGGTGCGCCACGAAAAGGAAAGTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATTTGGAGAGAAGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTTCATTCACCGTCATCAAGCTTCCGGAATGATGCTGATCTTGTTGATGAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAATTTCGTTGTGCACGGAATCTAAAGCTGTTATTATTGGCCTTTGGGGCATGGGCAGTGTTGGTAAGACAACTCTTGCGAATGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAAAAGATGCAAGTCCCTTTGTCACGACTGGCGGGATAACTAATTTTTCCAAGAAAAGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACATGCATGGTTTGGGGAAAGTAGCAGAATCATAATGACAACAAGAGATAAGCATGTCCTTGTTAAGGCGGGCGCTAATCATATTCATCAAGTTAAGACATTGAATTCTGATGATTCCCTTAAGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCATTATAAAAGCAGAACAAGTTGAGTTGTCCAAGAGAGTGCTTAACTATTGCAAAGGCCTTCCCTTAGCAATAAAAATCTTGGGTTCCTTCCTTAAAAGAAAAACTCAACAAGAGTGGGAAAGTGAACTGGCCAAACTTGAAAAGATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAATTAGATCGTAATGATTGGAATATATTTTTGGAACTTGCATGTTTTTTTGATACAAATACAGAAGACGAGCAGCTAAAATCTCTTCTTGATCGCTGTGGATACACAACTACTATCGGGTTGACAAATCTTTGTAATAATGCTCTTATTTCCATTTCAAACAATTGTGTGTCAATGCATGACTTAGTTCGAGAAATGGGCCGTGAAATTGTTCGTGAAGAATGTCTAAATGATCCAGGAAAACGCAGTAGACTATGGGATTCTTGTGATACCTATGAAGTACTGAAATATAATAAGAGAACTCAAGCTATTCAAAGTATCACATTAAACATGTCTGAAATTGATATGATAAGATTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTTCATGCAGCCAATTCCAAAAACAAGTTGTGTGCTCCAGAAGGTATTACATCCCTGCCAGAGAAGTTAAGGTATTTTCATTGGGATGAGTTTCCTTTGAAATCTTTGCCATCTTCTTTTGGTGCTGAGAGATTTGTTGAAATCATAATGCCCAATAGTGGATTGCAAATGCTTTGGGAAGGTGAACAGAATCTTGTAAATATAAGGAAAGTGGATCTTGATGGTTCATCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCCCTGGTTGCAAGAGTCTGTGTCAAGTTCCTCCATCTGCTGTATGTTCCCAGAAGCTGAAATACCTGAAAGTGAGCAACTGTGAGAGCCTTGAATCCATAGCAGAGCTTCCAACATTGGTTATGTACGTAATTGCTCGCAACTGCTGCTCGCTACACACTGTATCTGTATCTGCTTTGGATTCTGTGGCCAAAGAACCGATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCACCAGCCGCAATTTTTTTTTCCCCAACATTATTTTTTGTGTTGTAGAACCCTTTTTCTTTTCTTGCCCCTTAGTGGTGAATTTCAAATTCTGTTAG 2280 0.3943 MFRLLPQRFSDTCVIFDNFCKEEDMAAHASSEIIKYDVFLNFRGTDTRRGFLSNLRKALEDKHIKTYVDYMLREGTEISHSLLAAIEQSEIALIIFFMLLPNDPSWVRHEKESYHHALANHEVRFADRVQIWREALKEAANLSGFHSPSSSFRNDADLVDEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLISLCTESKAVIIGLWGMGSVGKTTLANAVFNRLCDGFEGFCFLNNVRERAEKYGIDHLKTELLSKLLKEKDASPFVTTGGITNFSKKRLSRTKVLVVLDDVNDSDQMEDLCGGHAWFGESSRIIMTTRDKHVLVKAGANHIHQVKTLNSDDSLKLFSLNAFKQNCIIKAEQVELSKRVLNYCKGLPLAIKILGSFLKRKTQQEWESELAKLEKMPDEKIQSILRLSYNELDRNDWNIFLELACFFDTNTEDEQLKSLLDRCGYTTTIGLTNLCNNALISISNNCVSMHDLVREMGREIVREECLNDPGKRSRLWDSCDTYEVLKYNKRTQAIQSITLNMSEIDMIRLHPETFERMPELKLVRFHAANSKNKLCAPEGITSLPEKLRYFHWDEFPLKSLPSSFGAERFVEIIMPNSGLQMLWEGEQNLVNIRKVDLDGSSSLMELPDLSKASNLREVSIPGCKSLCQVPPSAVCSQKLKYLKVSNCESLESIAELPTLVMYVIARNCCSLHTVSVSALDSVAKEPIQQQQFEDITFNFTSRNFFFPNIIFCVVEPFFFSCPLVVNFKFC 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02892 759 Pfam Leucine Rich Repeat 599 616 IPR011713 -
Aip10g02892 759 Pfam TIR domain 35 96 IPR000157 GO:0007165
Aip10g02892 759 Gene3D Ribonuclease Inhibitor 511 711 IPR032675 -
Aip10g02892 759 SUPERFAMILY L domain-like 494 688 - -
Aip10g02892 759 Gene3D - 182 333 IPR027417 -
Aip10g02892 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 430 IPR027417 -
Aip10g02892 759 Pfam NB-ARC domain 190 422 IPR002182 GO:0043531
Aip10g02892 759 Gene3D - 337 422 IPR042197 -
Aip10g02892 759 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 107 706 - -
Aip10g02892 759 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 28 96 - -
Aip10g02892 759 PRINTS Disease resistance protein signature 373 387 - -
Aip10g02892 759 PRINTS Disease resistance protein signature 279 293 - -
Aip10g02892 759 PRINTS Disease resistance protein signature 616 632 - -
Aip10g02892 759 PRINTS Disease resistance protein signature 202 217 - -
Aip10g02892 759 SUPERFAMILY "Winged helix" DNA-binding domain 409 515 IPR036390 -
Aip10g02892 759 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 145 IPR035897 -
Aip10g02892 759 SMART till_3 35 142 IPR000157 GO:0007165
Aip10g02892 759 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 107 706 IPR044974 GO:0006952
Aip10g02892 759 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 96 IPR044974 GO:0006952
Aip10g02892 759 Gene3D - 30 99 IPR035897 -
Aip10g02892 759 Gene3D - 100 175 IPR035897 -
Aip10g02892 759 ProSiteProfiles TIR domain profile. 34 170 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02892 Aip-Chr10 123231322 123234466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02892 36 689 WRKY Transcription Factor Family AT4G12020 31.495 1.86e-83 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02892 - - aip:107624503 1308.89