Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02879 ATGGAAGAAACATTTGTTCCCTTCCGTGGGATTAAGAATGACCTGAAAGCGAGAATTTTGTGCTACAAGCAAGACTGGACCAGTGGATTCCAATCTGGTTTCAGGATCCTGGCCCCAACAACATACATATTTTTTGCTTCAGCAATTCCGGTTATATCTTTCGGGGAGCAACTGGAGAGAAATACTGATGGAACTCTCACTGCAGTGCATAGTCTGGCATCAACAGCTATTTGCGGCATTATCCACTCGGTCTTTGGAGGTCAGCCACTCCTCATTGTAGGTGTAGCTGAGCCCACAGTTCTGATGTACACATTCATGTACAACTTTGCAAAGGATAGAAAAGATTTGGGACACAAATTGTTCTTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCCTTGTTGCTTTTCTTGCTTTCCATTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCGTTGCTGGTGAACTATTTGGTTTGCTAATTGCAATGCTCTTTATGCAGCAGGCCATAAAGGGACTTGTTGAAGAATTTGGTGTACCTAAGAACCAGAGTGAAGGTAGTACTAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCGTTGGTCTTGTCATTTGGCCTTCTTTTTACCGGACTACAGAGCCGTAAGGCTAGATCCTGGCGTTATGGGACAGGTTGGCTAAGGGGATTAATAGCTGATTATGGAGTCCCTATAATGGTTCTTGTGTGGACTTCTGTTTCTTATATACCTGTTAATAAAGTTCCAAGGGGAGTCCCCAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTATCAAGGAGATGTTGGATGTGCCGATCTTATATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAACGTTTCATCACAGCTTGCACAACAGGAGGAGTTCAATCTAAGAAAACCCCCATCTTATCACTATGACTTGCTAATATTGGGAATTATGACCATACTCTGTGGGCTTATTGGTATCCCTCCTTCAAATGGTGTGATTCCACAATCTCCAATGCATACCAAAAGCTTAGCTACCCTAAAACATCAGCTTTTACGAAATAAGCTTGTATCTACTGCACGAAAAAGCATGCGGAGAAATGTGAATCTGAGTCAGTTATATCAAAGTATGCGAGAAGCATATGACGAAATGCAGACTCCTTTGGTTCCTCAAATGCCACCTACCTTGGGCCTGAAGGAGCTGAAGGAATCAACCATTCAACTGGCTTCAAGTCAAGGATACATTGATGCTCCTGTTGATGAGGTTGTCTTCGATGTGAATAAGGACATTGATGATCTTTTGCCATTTGAAGTTAAAGAGCAACGCCTTAGCAATCTACTGCAGTCGTTGATGGTTGGAGCTTGTGTTGCTGCCATGCCTCTTTTGAAGAAGATACCTTCTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCTGGAAATCAGTTTTGGGAAAGAATATTGTATCTTTTCACGGCTCCAAGCAGAAGATACAAGTATATTCATGCTCACATTTTTATCATTGCCTTAGTTACAGGACTTATGAATTTAAATATTTTTCCTAGACATTCATTCCTTTCATGA 1677 0.4204 MEETFVPFRGIKNDLKARILCYKQDWTSGFQSGFRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVHSLASTAICGIIHSVFGGQPLLIVGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFGVPKNQSEGSTNQIALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGTGWLRGLIADYGVPIMVLVWTSVSYIPVNKVPRGVPRRLFSPNPWSPGAYSNWTVIKEMLDVPILYIIGAFIPATMIAVLYYFDHNVSSQLAQQEEFNLRKPPSYHYDLLILGIMTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQSMREAYDEMQTPLVPQMPPTLGLKELKESTIQLASSQGYIDAPVDEVVFDVNKDIDDLLPFEVKEQRLSNLLQSLMVGACVAAMPLLKKIPSSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKYIHAHIFIIALVTGLMNLNIFPRHSFLS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02879 558 PANTHER ANION EXCHANGE PROTEIN 1 535 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aip10g02879 558 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Aip10g02879 558 Pfam HCO3- transporter family 205 376 IPR011531 GO:0006820|GO:0016021
Aip10g02879 558 Pfam HCO3- transporter family 464 527 IPR011531 GO:0006820|GO:0016021
Aip10g02879 558 Gene3D Helical hairpin bin 18 60 - -
Aip10g02879 558 PANTHER BORON TRANSPORTER 2-RELATED 1 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02879 Aip-Chr10 122841665 122847122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02879 1 535 Antiporters AT3G62270 76.822 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02879 K24194 - gmx:100793554 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02879 10 122841665 122847122 Aip10g02879 10 122841665 122847122 ECH