Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02875 ATGGTGTCTTCATGGAGTATTGCCTTTGCCACAATCGCTTTGGCAATCCTCATATACCGTATCGTCAAGTTTGTTACCCGGCCGTCGTTACCACTACCCCCGGGCCCAAAGCCGTGGCCAATAATAGGAAACTTGCCACACTTGGGCCCAGTGCCCCACCATGCTATTGCAGCCCTAGCCAAAGTGCATGGTCCTCTCATGCACCTTAGACTAGGGATGGTAGACGTGGTGGTGGCCGCATCGGCGAAAGTAGCGGAGCAGTTCTTGAAGGTGCACGACGCCAATTTCAGTAGCAGGCCCCCAAATGCAGGGGCAAAGTACATAGCATATAACTATCAAGATCTTGTGTTTGCACCTTACGGACCAAGGTGGAGGATGCTCAGGAAAATTAGCTCACTTCATCTTTTCTCTGCCAAGGCCTTGGATGATTTCAAACACTTGCGTCAGGGAGAGGTTGCAAGATTGACCAAGAACATAGCAAGTAGCACAGACACATCAAAAGCTGTGAACTTAGGACAACTGTTAAATGTATGCACCACAAATGCATTGGCCAGGGTAATGATAGGAAGGAGAGTGTTCAATGATGGAAATGGTGGGTGTGATCCAAGAGCTGATGAGTTCAAATCAATGGTCGTGGAGGTTATGGTTTTGGCTGGAGTCTTCAACATTGGTGACTTTATTCCTTGTTTGGAGTGGCTAGACCTTCAAGGGGTCCAAGCCAAGATGAAGAAATTGCATAAGAGGTTTGATTCATTCTTAACAAGCATTGTTGAGGAGCACAAGAAGAATCCCAACAAAAGTGAGAAGCATAAGGATATGTTGAGTACTTTGTTGTCACTTCAAGAGGCTTCCGATGATAATGATGGCACCAAACTCACAGACACCGAGATCAAAGCTTTGCTTCTGAATATGTTTACTGCAGGAACAGACACATCATCAAGCACTACAGAATGGGCAATTGCAGAACTAATAAGGAACCCAAGAATCATGGGGCAAGTCCAGAATGAATTAGACAGTGTAGTAGGAAGGGAAAGGCACGTGACAGAAGAGGACTTGCCCAATTTGCCATACCTTCAAGCAGTGGTCAAAGAAACCTTCCGTTTGCACCCATCAACCCCACTTTCCCTCCCAAGAGTGGCAGCAAAGAGCTGTGAGATCTTAGGGTACCACATCCCAGAAGGTGCAACGCTCTTGGTCAATGTTTGGGCCATAGCCCGTGATCCAAAGGAATGGGCTGAACCATTGGAGTTCAGGCCCGAGAGGTTCCTAAAGGGTGGTGAGAAGGCTGATGTTGATGTTAGGGGGAATGACTTTGAGGTCATTCCCTTTGGTGCTGGGAGAAGGATATGTGCTGGGATGACTCTTGGGCTTAGAATGGTTCAGCTCTTGACAGCAACCTTGGTCCACTCATTTGATTGGGAGCTTGAGGGTGGCCTTAAACAGGAGGACCTCAACATGGATGAAGCATATGGGCTTACCCTTCAACGAGCTTTGCCTCTTTCGGTGCATCCAAAGCCCAGGCTTTCTTCTCATGTTTACTCATCATCTGAATAA 1554 0.4743 MVSSWSIAFATIALAILIYRIVKFVTRPSLPLPPGPKPWPIIGNLPHLGPVPHHAIAALAKVHGPLMHLRLGMVDVVVAASAKVAEQFLKVHDANFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRMLRKISSLHLFSAKALDDFKHLRQGEVARLTKNIASSTDTSKAVNLGQLLNVCTTNALARVMIGRRVFNDGNGGCDPRADEFKSMVVEVMVLAGVFNIGDFIPCLEWLDLQGVQAKMKKLHKRFDSFLTSIVEEHKKNPNKSEKHKDMLSTLLSLQEASDDNDGTKLTDTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRIMGQVQNELDSVVGRERHVTEEDLPNLPYLQAVVKETFRLHPSTPLSLPRVAAKSCEILGYHIPEGATLLVNVWAIARDPKEWAEPLEFRPERFLKGGEKADVDVRGNDFEVIPFGAGRRICAGMTLGLRMVQLLTATLVHSFDWELEGGLKQEDLNMDEAYGLTLQRALPLSVHPKPRLSSHVYSSSE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02875 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Aip10g02875 517 Gene3D Cytochrome P450 19 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 505 - -
Aip10g02875 517 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 SUPERFAMILY Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02875 517 PANTHER FLAVONOID 3'-MONOOXYGENASE 5 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02875 Aip-Chr10 122721281 122725689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02875 9 514 Cytochrome P450 AT5G07990 66.341 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02875 K05280 - gmx:547475 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02875 10 122721281 122725689 Aip10g02875 10 122721281 122725689 ECH