Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02863 ATGGATGATCATAAATCTGAGGATCAACACCTGGTGGCGGCAGCGCAGCACATTTTAAAGGCGTTGGCGGCAAGCAAGGCTGTCTCCGATGATCTGAGAAAAACTCTCTTGGATTTCGATATTCACCTATCAGCCATGTCCATAGTTGAAAGGAGCATCAAGCAGCTAGAAAGGAAAATTAAATTTGCCGAAGGCAAAATAATGACTTGGAAAGCGAAGAATTCGATGATATGGGACTGCGGTTCCAAGGAATCTTCCGAGTATTTAGAAGCCCACAAGCAATACCTTGAACCGGAATCTTTCGCGAACGAGGCCGGTTCAGTTGATCTGGTTAATCCTGCGTTAATTCCAGATCTCAAGAGCATTGCAAATGTCATGTTCGGTTCCAAGTACCATCAGGAGTTTTGCCAGACTTTCATTTCTTCGAGACGCGACGCCTTGGACGAGTTCTTCGTGGTTCTTGAAATAGAAAGATTCAGCAACGAGAACGTCATGAAAATGGAAGGGAATTGCTTGAATCGCGAGATAAAGAAGTGGATTCGCGCCGTGAAGATAGTCTTTCAGGTGTATCTCGTCGCAGAGAAACGGTTGTGTAAGCAAATTCTTGGAGACTTCAACGACTCTGTTTATCAGTTCTGCTTCGCCGAGATAACTTTGAGTTTCGTGTTGAAACTTTTGAATTTTGGTGAGGCCGTAGCAATGGGAAACCGTTCACCGGAGAAACTGTTCTGTTTTCTAGACATCTATGAAGTTTTGGAGAATCTCGCTGTCTATGTAGACATTTTGTTCTTTGAAGAATTTGGTTCATTTGTAAGAGATGAGTTTCACAAGCTTCTAAACAAGTTTGGTGAAGCTTCAAAGTTCACATTTTTAGCATTTAAAAATGCTATTGCAAATGATCCTTCAAAGGCGCGATTCCCTGGTGGCGGAGTTCACCATCTTACCAAATATGTAATGAATTTCATCAAGACACTGGCGGAATATGGCGAGGCACTCAACCTTCTCCTGGCGGACGAGACTCCGGCCGACCCAGAAGGCAATGATGACGATGACAGCCATCCTTTGGCTGGCGAATTCTGGTCGGTGGCGGCCACTCTTGAATCCAACCTGATCAGTAAGTCCAAATTGTACAAAGATGTGGCATTGCAACATGTATTCATGATGAATAACATTCACTACATGGTCCAAAAGGCTAAGTCCTCGGAACTAAGCTTAGTGTTCGGCGATCGATGGCTTCGTCGGCACGTTGCCAAGTTCCGAGATAATGCTAGAAGCTATGAGAGGGTAACTTGGGGTCCAATACTCTCTATTCTGAAACAAGAAAACGCTGAATTGAATTGCACTTCTTCGAAGGAAAATCTAAAGAAAAAGTGCAAAGATTTCAATGCTTCTTTTAGTGAAACCTATAGGTCACAAACAGGGTGGTATATTCCAGATACTGAACTCCGTGAAGATGTACAAATCTCAATTTCTCAGAAAGTTGTTCATGCTTACCGGCAATTCACTGGGAGATATTCATCAACCATTGATGAGAAGTGGAAAAAGCACACTGTGGATGATATAGAGAACTATGTATTGGACCTTTTTGTAGCCACTGCTTTGTCTACTTCTCTTCAGAACATCAGAAGCTACAGCACAACATTCAAAAACTACACCCAGAACTATAACGCGAGTACGATCGGAATTGAAGGGAAGCTTGACGGTTGGAGCTGGAAGGCGAGCGCCACAACCAGAACTGAAAGGCGAGCACTGCCGGATCTGGAAGGCAAGCGTCGCCGGGTCTGGAAGGCGAGCTTCACGGGTGGGAGTTGGCTCCGTCCCAATTCTCTTTCCTCCATTCACAACAACAACCTATGCCTTCTCCATTATTTCGCTCACTGTCGTTGA 1887 0.4436 MDDHKSEDQHLVAAAQHILKALAASKAVSDDLRKTLLDFDIHLSAMSIVERSIKQLERKIKFAEGKIMTWKAKNSMIWDCGSKESSEYLEAHKQYLEPESFANEAGSVDLVNPALIPDLKSIANVMFGSKYHQEFCQTFISSRRDALDEFFVVLEIERFSNENVMKMEGNCLNREIKKWIRAVKIVFQVYLVAEKRLCKQILGDFNDSVYQFCFAEITLSFVLKLLNFGEAVAMGNRSPEKLFCFLDIYEVLENLAVYVDILFFEEFGSFVRDEFHKLLNKFGEASKFTFLAFKNAIANDPSKARFPGGGVHHLTKYVMNFIKTLAEYGEALNLLLADETPADPEGNDDDDSHPLAGEFWSVAATLESNLISKSKLYKDVALQHVFMMNNIHYMVQKAKSSELSLVFGDRWLRRHVAKFRDNARSYERVTWGPILSILKQENAELNCTSSKENLKKKCKDFNASFSETYRSQTGWYIPDTELREDVQISISQKVVHAYRQFTGRYSSTIDEKWKKHTVDDIENYVLDLFVATALSTSLQNIRSYSTTFKNYTQNYNASTIGIEGKLDGWSWKASATTRTERRALPDLEGKRRRVWKASFTGGSWLRPNSLSSIHNNNLCLLHYFAHCR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02863 628 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 104 534 - -
Aip10g02863 628 Pfam Exo70 exocyst complex subunit 177 526 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip10g02863 628 Coils Coil 46 73 - -
Aip10g02863 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 18 92 IPR004140 GO:0000145|GO:0006887
Aip10g02863 628 SUPERFAMILY Cullin repeat-like 86 529 IPR016159 -
Aip10g02863 628 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 18 92 - -
Aip10g02863 628 Gene3D Exocyst complex component Exo70 25 537 - -
Aip10g02863 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 104 534 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02863 Aip-Chr10 122403626 122406346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02863 109 529 EXO70 exocyst subunit family AT5G61010 47.307 1.07e-130 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02863 K07195 - gmx:100791622 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02863 10 122403626 122406346 Aip10g02863 10 122403626 122406346 ECH